evm.TU.supercontig_21.145 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_21.145 T287098_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.808 0.914
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.804 0.903
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.804 0.903
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.804 0.903
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.784 0.882
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.784 0.882
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.784 0.882
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.742 0.849
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.742 0.849
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.742 0.849
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.742 0.849
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.742 0.849
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.701 0.774
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.666 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_21.145 Myb 13 59
evm.model.supercontig_21.145 Myb 65 110

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

319 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GB53258 Apis mellifera GB53258 N 0.000
ACEP26872 Atta cephalotes ACEP26872 N 0.000
Cflo_01956--FBpp0110265_DROME Camponotus floridanus Cflo_01956--FBpp0110265_DROME N 0.000
Hsal_09526--XP_395321.2_APIME Harpegnathos saltator Hsal_09526--XP_395321.2_APIME N 0.000
HMEL012381 Heliconius melpomene HMEL012381 N 0.000
ISCW007820 Ixodes scapularis ISCW007820 N 0.000
ISCW017545 Ixodes scapularis ISCW017545 N 0.000
MCINX007706 Melitaea cinxia MCINX007706 N 0.000
NEMVEDRAFT_v1g217135 Nematostella vectensis NEMVEDRAFT_v1g217135 N 0.000
PHUM463900 Pediculus humanus PHUM463900 N 0.000
PAN0_017c5548 Pseudozyma antarctica PAN0_017c5548 I 0.000
PaG_01262 Pseudozyma aphidis PaG_01262 I 0.000
PSEUBRA_SCAF21g03367 Pseudozyma brasiliensis PSEUBRA_SCAF21g03367 I 0.000
PFL1_05375 Pseudozyma flocculosa PFL1_05375 I 0.000
PHSY_005564 Pseudozyma hubeiensis PHSY_005564 I 0.000
SPPG_07283 Spizellomyces punctatus SPPG_07283 I 0.000
sr10015 Sporisorium reilianum sr10015 I 0.000
SMAR015422 Strigamia maritima SMAR015422 N 0.000
ENSTRUG00000004613 Takifugu rubripes ENSTRUG00000004613 I 0.000
ENSTNIG00000019520 Tetraodon nigroviridis ENSTNIG00000019520 N 0.000
ENSTNIG00000019152 Tetraodon nigroviridis ENSTNIG00000019152 I 0.000
K437DRAFT_224239 Tilletiaria anomala K437DRAFT_224239 I 0.000
M407DRAFT_35594 Tulasnella calospora M407DRAFT_35594 I 0.000
UHOR_08093 Ustilago hordei UHOR_08093 I 0.000
UM05274 Ustilago maydis UM05274 I 0.000
J056_001839 Wallemia ichthyophaga J056_001839 I 0.000