gene32181-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene32181-v1.0-hybrid T287421_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.695 0.798
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.695 0.798
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna32181.1-v1.0-hybrid Myb 391 438
mrna32181.1-v1.0-hybrid Myb 444 502

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.736
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.724
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.695
WER Arabidopsis thaliana AT5G14750 D 0.695
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.695
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.672
Bo2g012170 Brassica oleracea Bo2g012170 I 0.695
Bo9g165670 Brassica oleracea Bo9g165670 I 0.678
Bra025311 Brassica rapa Bra025311 I 0.671
Bra008740 Brassica rapa Bra008740 I 0.678
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.695
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.695
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.752
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.675
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.678
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.675
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.732
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.783
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.695
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.686
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.713
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.746
MDP0000650225 Malus domestica MDP0000650225 I 0.829
MDP0000578193 Malus domestica MDP0000578193 I 0.784
MDP0000537324 Malus domestica MDP0000537324 I 0.698
MDP0000266683 Malus domestica MDP0000266683 I 0.730
MDP0000199965 Malus domestica MDP0000199965 I 0.668
MDP0000164048 Malus domestica MDP0000164048 I 0.692
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.793
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.769
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.679
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.777
Pm024725 Prunus mume Pm024725 I 0.802
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.778
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.782
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.738
TCM_012057 Theobroma cacao TCM_012057 I 0.783
TCM_016886 Theobroma cacao TCM_016886 I 0.731
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.698
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.680
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.797