Gorai.004G188300 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.004G188300 T287549_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.767 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G188300.1 Myb 319 369
Gorai.004G188300.2 Myb 319 369
Gorai.004G188300.3 Myb 319 369

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.000
Eucgr.K02780 Eucalyptus grandis Eucgr.K02780 I 0.000
Eucgr.K02193 Eucalyptus grandis Eucgr.K02193 I 0.000
MLOC_51143 Hordeum vulgare MLOC_51143 I 0.000
LPERR09G02820 Leersia perrieri LPERR09G02820 I 0.000
LPERR09G02840 Leersia perrieri LPERR09G02840 I 0.000
mgf021642m Mimulus guttatus mgf021642m I 0.000
OBART01G06430 Oryza barthii OBART01G06430 I 0.000
OB09G12530 Oryza brachyantha OB09G12530 I 0.000
ORGLA09G0030400 Oryza glaberrima ORGLA09G0030400 I 0.000
ORGLA09G0030300 Oryza glaberrima ORGLA09G0030300 I 0.000
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.000
OGLUM09G04690 Oryza glumaepatula OGLUM09G04690 I 0.000
OGLUM09G04680 Oryza glumaepatula OGLUM09G04680 I 0.000
BGIOSGA038064 Oryza indica BGIOSGA038064 I 0.000
BGIOSGA030065 Oryza indica BGIOSGA030065 I 0.000
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.000
OLONG_020978 Oryza longistaminata OLONG_020978 I 0.000
OMERI09G03020 Oryza meridionalis OMERI09G03020 I 0.000
OMERI09G03030 Oryza meridionalis OMERI09G03030 I 0.000
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.000
ONIVA09G04180 Oryza nivara ONIVA09G04180 I 0.000
ONIVA09G04210 Oryza nivara ONIVA09G04210 I 0.000
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.000
OPUNC09G03530 Oryza punctata OPUNC09G03530 I 0.000
OPUNC09G03540 Oryza punctata OPUNC09G03540 I 0.000
ORUFI09G04400 Oryza rufipogon ORUFI09G04400 I 0.000
ORUFI09G04420 Oryza rufipogon ORUFI09G04420 I 0.000
OS01G0313300 Oryza sativa OS01G0313300 I 0.000
OS09G0286600 Oryza sativa OS09G0286600 I 0.000
OS09G0287000 Oryza sativa OS09G0287000 I 0.000
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.000
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.000
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.000
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.000
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.000
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.000
Si002845m.g Setaria italica Si002845m.g I 0.000
Solyc03g118190.2 Solanum lycopersicum Solyc03g118190.2 I 0.000
Solyc04g051360.2 Solanum lycopersicum Solyc04g051360.2 I 0.000
PGSC0003DMG400014240 Solanum tuberosum PGSC0003DMG400014240 I 0.000
PGSC0003DMG400019693 Solanum tuberosum PGSC0003DMG400019693 I 0.000
Sb07g022180 Sorghum bicolor Sb07g022180 I 0.000
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.000
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I 0.000
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.000
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.000
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.000
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.000
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I 0.000
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.000
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.000