Gorai.005G234900 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.005G234900 T287577_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.786 0.849
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.786 0.849
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.786 0.849
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.774 0.871
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.749 0.860
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.749 0.860
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.736 0.839
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.727 0.817
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.727 0.817
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.727 0.817
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.727 0.817
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.727 0.817
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.681 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G234900.1 Myb 9 55
Gorai.005G234900.1 Myb 61 106

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

316 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014907 Ailuropoda melanoleuca ENSAMEG00000014907 I 0.000
ENSAMXG00000015946 Astyanax mexicanus ENSAMXG00000015946 I 0.000
HSF5 Bos taurus ENSBTAG00000001166 I 0.000
fgenesh2_pg.scaffold_315000002 Branchiostoma floridae fgenesh2_pg.scaffold_315000002 I 0.000
fgenesh2_pg.scaffold_142000054 Branchiostoma floridae fgenesh2_pg.scaffold_142000054 I 0.000
estExt_fgenesh2_pg.C_70302 Branchiostoma floridae estExt_fgenesh2_pg.C_70302 I 0.000
estExt_fgenesh2_pg.C_500047 Branchiostoma floridae estExt_fgenesh2_pg.C_500047 I 0.000
HSF5 Canis familiaris ENSCAFG00000017528 I 0.000
ENSCAFG00000023067 Canis familiaris ENSCAFG00000023067 I 0.000
ENSCAFG00000029639 Canis familiaris ENSCAFG00000029639 I 0.000
HSF5 Cavia porcellus ENSCPOG00000003431 I 0.000
ENSCSAG00000007182 Chlorocebus sabaeus ENSCSAG00000007182 I 0.000
hsf5 Danio rerio ENSDARG00000104686 I 0.000
HSF5 Dasypus novemcinctus ENSDNOG00000014871 I 0.000
HSF5 Echinops telfairi ENSETEG00000014190 I 0.000
ENSECAG00000008677 Equus caballus ENSECAG00000008677 I 0.000
ENSECAG00000008708 Equus caballus ENSECAG00000008708 I 0.000
ENSECAG00000009495 Equus caballus ENSECAG00000009495 I 0.000
HSF5 Erinaceus europaeus ENSEEUG00000012375 I 0.000
ENSFALG00000014220 Ficedula albicollis ENSFALG00000014220 I 0.000
ENSGMOG00000013287 Gadus morhua ENSGMOG00000013287 I 0.000
HSF5 Gallus gallus ENSGALG00000001031 I 0.000
HSF5 Gorilla gorilla ENSGGOG00000013788 I 0.000
HSFY2 Homo sapiens ENSG00000169953 D 0.000
HSFX1 Homo sapiens ENSG00000171116 I 0.000
HSFY1 Homo sapiens ENSG00000172468 D 0.000
HSF5 Homo sapiens ENSG00000176160 D 0.000
HSFX2 Homo sapiens ENSG00000268738 I 0.000
ENSSTOG00000020272 Ictidomys tridecemlineatus ENSSTOG00000020272 I 0.000
ENSLACG00000015426 Latimeria chalumnae ENSLACG00000015426 I 0.000
ENSLOCG00000002988 Lepisosteus oculatus ENSLOCG00000002988 I 0.000
HSF5 Loxodonta africana ENSLAFG00000029785 I 0.000
ENSP00000359444 Macaca fascicularis ENSP00000359444 I 0.000
HSF5 Macaca mulatta ENSMMUG00000004184 I 0.000
ENSMMUG00000002887 Macaca mulatta ENSMMUG00000002887 I 0.000
ENSMEUG00000007286 Macropus eugenii ENSMEUG00000007286 I 0.000
Hsfy2 Mus musculus ENSMUSG00000045336 I 0.000
Myotis_brandtii_HSFY1_10020625 Myotis brandtii Myotis_brandtii_HSFY1_10020625 I 0.000
HSF5 Myotis lucifugus ENSMLUG00000006132 I 0.000
ENSMLUG00000015387 Myotis lucifugus ENSMLUG00000015387 I 0.000
ENSMLUG00000022730 Myotis lucifugus ENSMLUG00000022730 I 0.000
NEMVEDRAFT_v1g86916 Nematostella vectensis NEMVEDRAFT_v1g86916 I 0.000
ENSNLEG00000013483 Nomascus leucogenys ENSNLEG00000013483 I 0.000
HSF5 Oryctolagus cuniculus ENSOCUG00000009733 I 0.000
ENSOGAG00000026441 Otolemur garnettii ENSOGAG00000026441 I 0.000
ENSOARG00000003920 Ovis aries ENSOARG00000003920 I 0.000
HSF5 Pan troglodytes ENSPTRG00000009453 I 0.000
ENSPANG00000004032 Papio anubis ENSPANG00000004032 I 0.000
ENSPFOG00000024243 Poecilia formosa ENSPFOG00000024243 I 0.000
Pvit_11979 Pogona vitticeps Pvit_11979 I 0.000
ENSPPYG00000008231 Pongo abelii ENSPPYG00000008231 I 0.000
ENSPPYG00000020808 Pongo abelii ENSPPYG00000020808 I 0.000
HSF5 Procavia capensis ENSPCAG00000011323 I 0.000
HSF5 Pteropus vampyrus ENSPVAG00000002322 I 0.000
maker-pag1_scaffold_1127-snap-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_1127-snap-gene-0.1 I 0.000
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I 0.000
HSF5 Sus scrofa ENSSSCG00000017641 I 0.000
ENSSSCG00000012732 Sus scrofa ENSSSCG00000012732 I 0.000
ENSTGUG00000015457 Taeniopygia guttata ENSTGUG00000015457 I 0.000
ENSTRUG00000016913 Takifugu rubripes ENSTRUG00000016913 I 0.000
ENSTRUG00000017318 Takifugu rubripes ENSTRUG00000017318 I 0.000
ENSTRUG00000015486 Takifugu rubripes ENSTRUG00000015486 I 0.000
ENSTRUG00000012122 Takifugu rubripes ENSTRUG00000012122 I 0.000
ENSTRUG00000010837 Takifugu rubripes ENSTRUG00000010837 I 0.000
ENSTRUG00000008763 Takifugu rubripes ENSTRUG00000008763 I 0.000
ENSTRUG00000004613 Takifugu rubripes ENSTRUG00000004613 I 0.000
ENSTNIG00000019520 Tetraodon nigroviridis ENSTNIG00000019520 N 0.000
ENSTNIG00000019152 Tetraodon nigroviridis ENSTNIG00000019152 I 0.000
ENSTNIG00000016643 Tetraodon nigroviridis ENSTNIG00000016643 N 0.000
ENSTNIG00000008554 Tetraodon nigroviridis ENSTNIG00000008554 I 0.000
HSF5 Tursiops truncatus ENSTTRG00000006851 I 0.000