Gorai.007G218100 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.007G218100 T287638_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.878 0.946
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.858 0.935
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.858 0.935
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.849 0.935
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.799 0.860
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.799 0.860
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.799 0.860
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.773 0.839
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.773 0.839
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.773 0.839
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.773 0.839
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.773 0.839
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.680 0.763
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.661 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G218100.1 Myb 16 62
Gorai.007G218100.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

315 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.000
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.000
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.000
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.000
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.000
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.000
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.000
ASU_05752 Ascaris suum ASU_05752 N 0.000
ASU_05994 Ascaris suum ASU_05994 N 0.000
ASU_07820 Ascaris suum ASU_07820 N 0.000
ASU_09087 Ascaris suum ASU_09087 N 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
BTMF_0001080901 Brugia timori BTMF_0001080901 N 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
CBN25379 Caenorhabditis brenneri CBN25379 I 0.000
CBG09136 Caenorhabditis briggsae CBG09136 N 0.000
CBG20663 Caenorhabditis briggsae CBG20663 N 0.000
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.000
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
CJA19030 Caenorhabditis japonica CJA19030 N 0.000
CRE11852 Caenorhabditis remanei CRE11852 N 0.000
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.000
GI18750 Drosophila mojavensis FBgn0141489 N 0.000
GL11071 Drosophila persimilis FBgn0148681 N 0.000
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.000
GK22092 Drosophila willistoni FBgn0224077 N 0.000
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.000
ENSGMOG00000010503 Gadus morhua ENSGMOG00000010503 N 0.000
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.000
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NECAME_17555 Necator americanus NECAME_17555 N 0.000
NECAME_17981 Necator americanus NECAME_17981 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.000
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.000
OFLC_0000261801 Onchocerca flexuosa OFLC_0000261801 N 0.000
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.000
nOo.2.0.1.g04208 Onchocerca ochengi nOo.2.0.1.g04208 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.000
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
PPA02261 Pristionchus pacificus PPA02261 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.000
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.000
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L889_g29516 Steinernema feltiae L889_g29516 N 0.000
L889_g30211 Steinernema feltiae L889_g30211 N 0.000
L889_g6592 Steinernema feltiae L889_g6592 N 0.000
L889_g9094 Steinernema feltiae L889_g9094 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L893_g29974 Steinernema glaseri L893_g29974 N 0.000
L898_g4830 Steinernema monticolum L898_g4830 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
L892_g19058 Steinernema scapterisci L892_g19058 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.000
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.000
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.000
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.000
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.000
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.000
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.000
WUBG_16399 Wuchereria bancrofti WUBG_16399 N 0.000