CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Gorai.007G276500 *(Gossypium raimondii)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Gorai.007G276500	T287647_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CDC5 M02698_2.00	Arabidopsis thaliana	NVCGCTGAGBN	NVCTCAGCGBN	SELEX Mathelier et al.(2014) MA0579.1	0.909	0.989
CDC5 M11037_2.00	Arabidopsis thaliana	NVCGCTGAGBN	NVCTCAGCGBN	Transfac Matys et al.(2006) P$CDC5_01	0.909	0.989
CDC5L M11049_2.00	Homo sapiens	GWKTTAAYRTAD	HTAYRTTAAMWC	Transfac Matys et al.(2006) V$CDC5_01	0.814	0.880
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Gorai.007G276500.1	Myb	7	53	GGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWL
Gorai.007G276500.1	Myb	59	103	KTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLL
Gorai.007G276500.2	Myb	7	53	GGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWL
Gorai.007G276500.2	Myb	59	103	KTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLL
Gorai.007G276500.3	Myb	7	53	GGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWL
Gorai.007G276500.3	Myb	59	103	KTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLL

Links
Other Myb/SANT family TFs
Other *Gossypium raimondii* TFs