orange1.1g047269m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g047269m.g T288947_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.680 0.796
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.680 0.796
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.663 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g047269m Myb 9 56
orange1.1g047269m Myb 62 107

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g066790 Brassica oleracea Bo6g066790 I 0.000
Ca_21669 Cicer arietinum Ca_21669 I 0.000
LPERR05G22060 Leersia perrieri LPERR05G22060 I 0.000
MDP0000175240 Malus domestica MDP0000175240 I 0.000
mgf026576m Mimulus guttatus mgf026576m I 0.000
OBART05G26430 Oryza barthii OBART05G26430 I 0.000
OB05G34020 Oryza brachyantha OB05G34020 I 0.000
ORGLA03G0413100 Oryza glaberrima ORGLA03G0413100 I 0.000
ORGLA05G0229200 Oryza glaberrima ORGLA05G0229200 I 0.000
OGLUM05G28080 Oryza glumaepatula OGLUM05G28080 I 0.000
OLONG_010067 Oryza longistaminata OLONG_010067 I 0.000
OMERI03G30520 Oryza meridionalis OMERI03G30520 I 0.000
ONIVA05G28480 Oryza nivara ONIVA05G28480 I 0.000
OPUNC05G24020 Oryza punctata OPUNC05G24020 I 0.000
ORUFI05G28340 Oryza rufipogon ORUFI05G28340 I 0.000
OS05G0571200 Oryza sativa OS05G0571200 I 0.000
Pavir.Ea02282 Panicum virgatum Pavir.Ea02282 I 0.000
Pavir.Eb01752 Panicum virgatum Pavir.Eb01752 I 0.000
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.000
29729.m002370 Ricinus communis 29729.m002370 I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
Si002203m.g Setaria italica Si002203m.g I 0.000
Solyc05g050330.2 Solanum lycopersicum Solyc05g050330.2 I 0.000
Solyc05g050340.2 Solanum lycopersicum Solyc05g050340.2 N 0.000
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.000
PGSC0003DMG402033880 Solanum tuberosum PGSC0003DMG402033880 N 0.000
PGSC0003DMG401033880 Solanum tuberosum PGSC0003DMG401033880 N 0.000
PGSC0003DMG400033884 Solanum tuberosum PGSC0003DMG400033884 N 0.000
PGSC0003DMG400017990 Solanum tuberosum PGSC0003DMG400017990 I 0.000
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.000
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.000
GRMZM2G411766 Zea mays GRMZM2G411766 I 0.000