Pavir.Da00077 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Da00077 T289077_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.680 0.753
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.680 0.753
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.663 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da00077.1.p Myb 16 63
Pavir.Da00077.1.p Myb 69 114

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_046260 Acremonium chrysogenum ACRE_046260 I 0.000
AB00609.1 Alternaria brassicicola AB00609.1 I 0.000
e_gw1.00815.24.1 Aspergillus carbonarius e_gw1.00815.24.1 I 0.000
ACLA_074570 Aspergillus clavatus CADACLAG00006464 I 0.000
CADAFLAG00003424 Aspergillus flavus CADAFLAG00003424 I 0.000
ANIA_07610 Aspergillus nidulans CADANIAG00000725 I 0.000
CADANGAG00012260 Aspergillus niger CADANGAG00012260 I 0.000
ATEG_02432 Aspergillus terreus CADATEAG00004930 I 0.000
M437DRAFT_41113 Aureobasidium melanogenum M437DRAFT_41113 I 0.000
M438DRAFT_373756 Aureobasidium pullulans M438DRAFT_373756 I 0.000
AUEXF2481DRAFT_46715 Aureobasidium subglaciale AUEXF2481DRAFT_46715 I 0.000
BAUCODRAFT_304562 Baudoinia compniacensis BAUCODRAFT_304562 I 0.000
COCC4DRAFT_183452 Bipolaris maydis COCC4DRAFT_183452 I 0.000
COCMIDRAFT_81700 Bipolaris oryzae COCMIDRAFT_81700 I 0.000
COCSADRAFT_166376 Bipolaris sorokiniana COCSADRAFT_166376 I 0.000
COCVIDRAFT_89906 Bipolaris victoriae COCVIDRAFT_89906 I 0.000
COCCADRAFT_90908 Bipolaris zeicola COCCADRAFT_90908 I 0.000
Bcin12g02060 Botrytis cinerea Bcin12g02060 I 0.000
estExt_Genewise1Plus.C_20967 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_20967 I 0.000
CFIO01_09528 Colletotrichum fioriniae CFIO01_09528 I 0.000
GLRG_07228 Colletotrichum graminicola GLRG_07228 I 0.000
CH063_12953 Colletotrichum higginsianum CH063_12953 I 0.000
CSUB01_03920 Colletotrichum sublineola CSUB01_03920 I 0.000
CCM_04908 Cordyceps militaris CCM_04908 N 0.000
DOTSEDRAFT_74570 Dothistroma septosporum DOTSEDRAFT_74570 I 0.000
PV08_02672 Exophiala spinifera PV08_02672 N 0.000
FFUJ_04566 Fusarium fujikuroi FFUJ_04566 I 0.000
FGRRES_17662 Fusarium graminearum FGRRES_17662 I 0.000
FPSE_07164 Fusarium pseudograminearum FPSE_07164 I 0.000
NechaG96746 Fusarium solani NechaG96746 I 0.000
GGTG_03663 Gaeumannomyces graminis GGTG_03663 I 0.000
CMQ_4177 Grosmannia clavigera CMQ_4177 I 0.000
LEMA_P035060.1 Leptosphaeria maculans LEMA_P035060.1 I 0.000
MGG_01414 Magnaporthe oryzae MGG_01414 I 0.000
MGG_02880 Magnaporthe oryzae MGG_02880 N 0.000
MAPG_01170 Magnaporthe poae MAPG_01170 I 0.000
MBM_00813 Marssonina brunnea MBM_00813 I 0.000
MYCTH_2310145 Myceliophthora thermophila MYCTH_2310145 I 0.000
fgenesh1_pm.C_scaffold_10000002 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_10000002 I 0.000
e_gw1.9.639.1 Mycosphaerella graminicola e_gw1.9.639.1 I 0.000
fgenesh1_pm.sca_82_chr10_2_0000188 Nectria haematococca fgenesh1_pm.sca_82_chr10_2_0000188 I 0.000
xlr-1 Neurospora crassa NCU06971 D 0.000
estExt_Genewise1Plus.C_120594 Neurospora discreta estExt_Genewise1Plus.C_120594 I 0.000
NEUTE1DRAFT_80073 Neurospora tetrasperma NEUTE1DRAFT_80073 I 0.000
OIDMADRAFT_199854 Oidiodendron maius OIDMADRAFT_199854 I 0.000
F503_01662 Ophiostoma piceae uamh F503_01662 I 0.000
Pc21g02790 Penicillium chrysogenum Pc21g02790 I 0.000
PEX1_036960 Penicillium expansum PEX1_036960 I 0.000
PITC_082180 Penicillium italicum PITC_082180 I 0.000
PMAA_036650 Penicillium marneffei PMAA_036650 I 0.000
PDE_07674 Penicillium oxalicum PDE_07674 I 0.000
PCH_Pc21g02790 Penicillium rubens PCH_Pc21g02790 I 0.000
PFICI_05114 Pestalotiopsis fici PFICI_05114 I 0.000
SNOG_08740 Phaeosphaeria nodorum SNOG_08740 I 0.000
PODANS_1_23020 Podospora anserina PODANS_1_23020 I 0.000
MYCFIDRAFT_190593 Pseudocercospora fijiensis MYCFIDRAFT_190593 I 0.000
GMDG_06572 Pseudogymnoascus destructans GMDG_06572 I 0.000
V499_08073 Pseudogymnoascus pannorum V499_08073 I 0.000
PTT_14914 Pyrenophora teres PTT_14914 I 0.000
SAPIO_CDS7493 Scedosporium apiospermum SAPIO_CDS7493 I 0.000
SBOR_4248 Sclerotinia borealis SBOR_4248 I 0.000
SS1G_08351 Sclerotinia sclerotiorum SS1G_08351 I 0.000
SETTUDRAFT_31256 Setosphaeria turcica SETTUDRAFT_31256 I 0.000
SMAC_00770 Sordaria macrospora SMAC_00770 I 0.000
SEPMUDRAFT_151346 Sphaerulina musiva SEPMUDRAFT_151346 I 0.000
SPBR_06407 Sporothrix brasiliensis SPBR_06407 I 0.000
HMPREF1624_00871 Sporothrix schenckii HMPREF1624_00871 I 0.000
S40288_02557 Stachybotrys chartarum S40288_02557 I 0.000
S40285_05834 Stachybotrys chlorohalonata S40285_05834 I 0.000
SNOG_08740 Stagonospora nodorum SNOG_08740 I 0.000
PMAA_036650 Talaromyces marneffei PMAA_036650 I 0.000
TSTA_055480 Talaromyces stipitatus TSTA_055480 I 0.000
THITE_2122523 Thielavia terrestris THITE_2122523 I 0.000
VHEMI00533 Torrubiella hemipterigena VHEMI00533 I 0.000
TRIATDRAFT_78601 Trichoderma atroviride TRIATDRAFT_78601 I 0.000
TRIREDRAFT_122208 Trichoderma reesei TRIREDRAFT_122208 I 0.000
TRIVIDRAFT_58714 Trichoderma virens TRIVIDRAFT_58714 I 0.000
UV8b_3245 Ustilaginoidea virens UV8b_3245 I 0.000
VDBG_01258 Verticillium albo atrum VDBG_01258 I 0.000
VDBG_01258 Verticillium alfalfae VDBG_01258 I 0.000
VDAG_08004 Verticillium dahliae VDAG_08004 I 0.000
Mycgr3G47382 Zymoseptoria tritici Mycgr3G47382 I 0.000