Pavir.Ea03421 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea03421 T289141_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03421.1.p Myb 38 86
Pavir.Ea03421.1.p Myb 143 190

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_09103 Aegilops tauschii F775_09103 I
F775_22242 Aegilops tauschii F775_22242 I
F775_26024 Aegilops tauschii F775_26024 I
F775_30481 Aegilops tauschii F775_30481 I
AMTR_s00001p00261430 Amborella trichopoda AMTR_s00001p00261430 I
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I
Aquca_013_00181 Aquilegia coerulea Aquca_013_00181 I
AN Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000066 I
LCL1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000163 I
fgenesh2_kg.3__982__AT3G09600.1 Arabidopsis lyrata fgenesh2_kg.3__982__AT3G09600.1 I
CCA1 Arabidopsis lyrata scaffold_403655.1 I
LHY Arabidopsis thaliana AT1G01060 D
CCA1 Arabidopsis thaliana AT2G46830 D
RVE8 Arabidopsis thaliana AT3G09600 D
RVE4 Arabidopsis thaliana AT5G02840 D
Bostr.2128s0168 Boechera stricta Bostr.2128s0168 I
Bostr.22252s0109 Boechera stricta Bostr.22252s0109 I
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I
Bostr.5325s0070 Boechera stricta Bostr.5325s0070 I
Bostr.7128s0434 Boechera stricta Bostr.7128s0434 I
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I
BRADI1G32330 Brachypodium distachyon BRADI1G32330 I
BRADI1G34840 Brachypodium distachyon BRADI1G34840 I
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I
BRADI3G51757 Brachypodium distachyon BRADI3G51757 I
Bo1g144410 Brassica oleracea Bo1g144410 I
Bo3g001090 Brassica oleracea Bo3g001090 I
Bo3g002070 Brassica oleracea Bo3g002070 I
Bo4g006930 Brassica oleracea Bo4g006930 I
Bo5g002430 Brassica oleracea Bo5g002430 I
Bo5g002760 Brassica oleracea Bo5g002760 I
Bo5g138190 Brassica oleracea Bo5g138190 I
Bo9g183320 Brassica oleracea Bo9g183320 I
Bra004503 Brassica rapa Bra004503 I
Bra005751 Brassica rapa Bra005751 I
Bra009562 Brassica rapa Bra009562 I
Bra029778 Brassica rapa Bra029778 I
Bra030496 Brassica rapa Bra030496 I
Bra033257 Brassica rapa Bra033257 I
Bra033291 Brassica rapa Bra033291 I
Bra034074 Brassica rapa Bra034074 I
PK02532.1 Cannabis sativa PK02532.1 D
PK06515.1 Cannabis sativa PK06515.1 I
PK20866.1 Cannabis sativa PK20866.1 I
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I
Cagra.0909s0012 Capsella grandiflora Cagra.0909s0012 I
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I
Cagra.1968s0093 Capsella grandiflora Cagra.1968s0093 I
Cagra.2240s0021 Capsella grandiflora Cagra.2240s0021 I
Carubv10001591m.g Capsella rubella Carubv10001591m.g I
Carubv10008551m.g Capsella rubella Carubv10008551m.g I
Carubv10009624m.g Capsella rubella Carubv10009624m.g I
Carubv10011679m.g Capsella rubella Carubv10011679m.g I
Carubv10014328m.g Capsella rubella Carubv10014328m.g I
Carubv10022831m.g Capsella rubella Carubv10022831m.g I
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I
evm.TU.supercontig_114.57 Carica papaya evm.TU.supercontig_114.57 I
evm.TU.supercontig_184.27 Carica papaya evm.TU.supercontig_184.27 I
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I
Cla005022 Citrullus lanatus Cla005022 I
Cla009284 Citrullus lanatus Cla009284 I
Cla018126 Citrullus lanatus Cla018126 I
Cla018914 Citrullus lanatus Cla018914 I
Cla021528 Citrullus lanatus Cla021528 I
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I
Cucsa.112530 Cucumis sativus Cucsa.112530 I
Cucsa.192960 Cucumis sativus Cucsa.192960 I
Cucsa.258660 Cucumis sativus Cucsa.258660 I
Cucsa.278220 Cucumis sativus Cucsa.278220 I
Cucsa.307250 Cucumis sativus Cucsa.307250 I
Cucsa.349800 Cucumis sativus Cucsa.349800 I
CMK043C Cyanidioschyzon merolae CMK043C I
Eucgr.A01184 Eucalyptus grandis Eucgr.A01184 I
Eucgr.A02733 Eucalyptus grandis Eucgr.A02733 I
Eucgr.D02320 Eucalyptus grandis Eucgr.D02320 I
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I
Thhalv10008035m.g Eutrema salsugineum Thhalv10008035m.g I
Thhalv10008382m.g Eutrema salsugineum Thhalv10008382m.g I
Thhalv10014025m.g Eutrema salsugineum Thhalv10014025m.g I
Thhalv10021220m.g Eutrema salsugineum Thhalv10021220m.g I
gene18104-v1.0-hybrid Fragaria vesca gene18104-v1.0-hybrid I
GLYMA03G33440 Glycine max GLYMA03G33440 I
GLYMA03G42260 Glycine max GLYMA03G42260 I
GLYMA07G05410 Glycine max GLYMA07G05410 I
GLYMA07G07200 Glycine max GLYMA07G07200 I
GLYMA10G05560 Glycine max GLYMA10G05560 I
GLYMA10G37520 Glycine max GLYMA10G37520 I
GLYMA13G19910 Glycine max GLYMA13G19910 I
GLYMA16G01980 Glycine max GLYMA16G01980 I
GLYMA16G03640 Glycine max GLYMA16G03640 I
GLYMA19G36170 Glycine max GLYMA19G36170 I
GLYMA19G45030 Glycine max GLYMA19G45030 I
GLYMA20G30250 Glycine max GLYMA20G30250 I
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I
Gorai.004G159700 Gossypium raimondii Gorai.004G159700 I
Gorai.006G178000 Gossypium raimondii Gorai.006G178000 I
Gorai.007G013200 Gossypium raimondii Gorai.007G013200 I
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I
Gorai.008G274500 Gossypium raimondii Gorai.008G274500 I
MLOC_14118 Hordeum vulgare MLOC_14118 I
MLOC_56804 Hordeum vulgare MLOC_56804 I
MLOC_59912 Hordeum vulgare MLOC_59912 I
MLOC_68189 Hordeum vulgare MLOC_68189 I
LPERR01G03340 Leersia perrieri LPERR01G03340 I
LPERR02G22740 Leersia perrieri LPERR02G22740 I
LPERR05G03900 Leersia perrieri LPERR05G03900 I
LPERR06G20160 Leersia perrieri LPERR06G20160 I
LPERR08G03480 Leersia perrieri LPERR08G03480 I
Lus10005134.g Linum usitatissimum Lus10005134.g I
Lus10007914.g Linum usitatissimum Lus10007914.g I
Lus10010100.g Linum usitatissimum Lus10010100.g I
Lus10014015.g Linum usitatissimum Lus10014015.g I
Lus10019902.g Linum usitatissimum Lus10019902.g I
Lus10030184.g Linum usitatissimum Lus10030184.g I
Lus10036392.g Linum usitatissimum Lus10036392.g I
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I
LjT02J13.100.nc Lotus japonicus LjT02J13.100.nc I
cassava12928.valid.m1 Manihot esculenta cassava12928.valid.m1 I
cassava12929.valid.m1 Manihot esculenta cassava12929.valid.m1 I
cassava18980.valid.m1 Manihot esculenta cassava18980.valid.m1 I
cassava18981.valid.m1 Manihot esculenta cassava18981.valid.m1 I
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I
cassava36811.valid.m1 Manihot esculenta cassava36811.valid.m1 I
cassava43542.valid.m1 Manihot esculenta cassava43542.valid.m1 I
cassava43543.valid.m1 Manihot esculenta cassava43543.valid.m1 I
cassava43544.valid.m1 Manihot esculenta cassava43544.valid.m1 I
cassava7251.valid.m1 Manihot esculenta cassava7251.valid.m1 I
MTR_0123s0070 Medicago truncatula MTR_0123s0070 I
MTR_7g118330 Medicago truncatula MTR_7g118330 I
est_orfs.8_8223_4279363:1 Micromonas pusilla est_orfs.8_8223_4279363:1 I
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I
estExt_fgenesh2_pg.C_Chr_080053 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_080053 I
estExt_fgenesh2_pg.C_Chr_110083 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_110083 I
mgf001364m Mimulus guttatus mgf001364m I
mgf012072m Mimulus guttatus mgf012072m I
mgf014004m Mimulus guttatus mgf014004m I
mgf015175m Mimulus guttatus mgf015175m I
mgf021826m Mimulus guttatus mgf021826m I
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I
GSMUA_Achr1G03720_001 Musa acuminata GSMUA_Achr1G03720_001 I
GSMUA_Achr1G06480_001 Musa acuminata GSMUA_Achr1G06480_001 I
GSMUA_Achr5G10280_001 Musa acuminata GSMUA_Achr5G10280_001 I
GSMUA_Achr7G04620_001 Musa acuminata GSMUA_Achr7G04620_001 I
GSMUA_Achr7G17560_001 Musa acuminata GSMUA_Achr7G17560_001 I
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I
OBART01G03720 Oryza barthii OBART01G03720 I
OBART02G27940 Oryza barthii OBART02G27940 I
OBART05G04360 Oryza barthii OBART05G04360 I
OBART05G04370 Oryza barthii OBART05G04370 I
OBART06G24250 Oryza barthii OBART06G24250 I
OB02G35240 Oryza brachyantha OB02G35240 I
OB05G14050 Oryza brachyantha OB05G14050 I
OB06G10430 Oryza brachyantha OB06G10430 I
OB06G32000 Oryza brachyantha OB06G32000 I
OB08G13700 Oryza brachyantha OB08G13700 I
ORGLA01G0032300 Oryza glaberrima ORGLA01G0032300 I
ORGLA02G0240100 Oryza glaberrima ORGLA02G0240100 I
ORGLA06G0204000 Oryza glaberrima ORGLA06G0204000 I
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I
OGLUM01G03980 Oryza glumaepatula OGLUM01G03980 I
OGLUM02G28500 Oryza glumaepatula OGLUM02G28500 I
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I
OGLUM06G25500 Oryza glumaepatula OGLUM06G25500 I
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I
BGIOSGA005842 Oryza indica BGIOSGA005842 I
BGIOSGA018757 Oryza indica BGIOSGA018757 I
BGIOSGA020708 Oryza indica BGIOSGA020708 I
BGIOSGA028019 Oryza indica BGIOSGA028019 I
OLONG_000103 Oryza longistaminata OLONG_000103 I
OMERI01G03530 Oryza meridionalis OMERI01G03530 I
OMERI02G27110 Oryza meridionalis OMERI02G27110 I
OMERI05G04320 Oryza meridionalis OMERI05G04320 I
OMERI06G24490 Oryza meridionalis OMERI06G24490 I
OMERI08G03470 Oryza meridionalis OMERI08G03470 I
ONIVA01G04110 Oryza nivara ONIVA01G04110 I
ONIVA02G31050 Oryza nivara ONIVA02G31050 I
ONIVA05G04710 Oryza nivara ONIVA05G04710 I
ONIVA06G30670 Oryza nivara ONIVA06G30670 I
ONIVA08G03410 Oryza nivara ONIVA08G03410 I
OPUNC01G03310 Oryza punctata OPUNC01G03310 I
OPUNC02G25660 Oryza punctata OPUNC02G25660 I
OPUNC06G21970 Oryza punctata OPUNC06G21970 I
OPUNC08G03280 Oryza punctata OPUNC08G03280 I
ORUFI01G03800 Oryza rufipogon ORUFI01G03800 I
ORUFI02G29430 Oryza rufipogon ORUFI02G29430 I
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I
ORUFI06G26070 Oryza rufipogon ORUFI06G26070 I
OS01G0156000 Oryza sativa OS01G0156000 I
OS02G0680700 Oryza sativa OS02G0680700 I
OS05G0162800 Oryza sativa OS05G0162800 I
OS08G0157600 Oryza sativa OS08G0157600 D
EuGene.0400010070 Ostreococcus RCC809 EuGene.0400010070 I
e_gw1.04.00.501.1 Ostreococcus tauri e_gw1.04.00.501.1 N
Pavir.Aa00937 Panicum virgatum Pavir.Aa00937 I
Pavir.Da00204 Panicum virgatum Pavir.Da00204 I
Pavir.Db00388 Panicum virgatum Pavir.Db00388 I
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I
Pavir.J28275 Panicum virgatum Pavir.J28275 N
Pavir.J34894 Panicum virgatum Pavir.J34894 I
Pavir.J37379 Panicum virgatum Pavir.J37379 N
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I
fgenesh1_pg.scaffold_160000002 Physcomitrella patens fgenesh1_pg.scaffold_160000002 I
fgenesh1_pg.scaffold_198000070 Physcomitrella patens fgenesh1_pg.scaffold_198000070 I
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I
gw1.46.107.1 Physcomitrella patens gw1.46.107.1 I
EFA77680.1 Polysphondylium pallidum EFA77680.1 I
POPTR_0002s16460 Populus trichocarpa POPTR_0002s16460 I
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I
POPTR_0006s13530 Populus trichocarpa POPTR_0006s13530 I
POPTR_0014s08520 Populus trichocarpa POPTR_0014s08520 I
POPTR_0014s10240 Populus trichocarpa POPTR_0014s10240 I
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I
POPTR_0016s08470 Populus trichocarpa POPTR_0016s08470 I
Pm018226 Prunus mume Pm018226 I
Pm028731 Prunus mume Pm028731 I
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I
PRUPE_ppa008029mg Prunus persica PRUPE_ppa008029mg I
29805.m001497 Ricinus communis 29805.m001497 I
30076.m004464 Ricinus communis 30076.m004464 I
30169.m006616 Ricinus communis 30169.m006616 I
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I
SapurV1A.0013s1130 Salix purpurea SapurV1A.0013s1130 I
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I
SapurV1A.0247s0220 Salix purpurea SapurV1A.0247s0220 I
SapurV1A.0804s0060 Salix purpurea SapurV1A.0804s0060 I
SELMODRAFT_137893 Selaginella moellendorffii SELMODRAFT_137893 I
SELMODRAFT_78045 Selaginella moellendorffii SELMODRAFT_78045 I
Si002704m.g Setaria italica Si002704m.g I
Si006824m.g Setaria italica Si006824m.g I
Si006883m.g Setaria italica Si006883m.g I
Si014685m.g Setaria italica Si014685m.g I
Si017977m.g Setaria italica Si017977m.g I
Solyc01g095030.2 Solanum lycopersicum Solyc01g095030.2 I
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I
Solyc06g036300.2 Solanum lycopersicum Solyc06g036300.2 I
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I
Solyc10g084370.1 Solanum lycopersicum Solyc10g084370.1 I
PGSC0003DMG400000189 Solanum tuberosum PGSC0003DMG400000189 I
PGSC0003DMG400011048 Solanum tuberosum PGSC0003DMG400011048 I
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I
PGSC0003DMG400028896 Solanum tuberosum PGSC0003DMG400028896 I
Sb03g005480 Sorghum bicolor Sb03g005480 I
Sb04g031820 Sorghum bicolor Sb04g031820 I
Sb07g003870 Sorghum bicolor Sb07g003870 I
TCM_005021 Theobroma cacao TCM_005021 I
TCM_005269 Theobroma cacao TCM_005269 I
TCM_015255 Theobroma cacao TCM_015255 I
TCM_022074 Theobroma cacao TCM_022074 I
Traes_6AL_362F82EAD Triticum aestivum Traes_6AL_362F82EAD I
Traes_6DL_30F715B53 Triticum aestivum Traes_6DL_30F715B53 I
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I
Traes_7DL_AB55D9F4E Triticum aestivum Traes_7DL_AB55D9F4E I
TRIUR3_06252 Triticum urartu TRIUR3_06252 I
TRIUR3_10644 Triticum urartu TRIUR3_10644 I
TRIUR3_13396 Triticum urartu TRIUR3_13396 I
VIT_08s0040g03220 Vitis vinifera VIT_08s0040g03220 I
VIT_15s0046g02260 Vitis vinifera VIT_15s0046g02260 I
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I
VIT_16s0050g01180 Vitis vinifera VIT_16s0050g01180 I
gw1.8.161.1 Volvox carteri gw1.8.161.1 I
GRMZM2G014902 Zea mays GRMZM2G014902 I
GRMZM2G029850 Zea mays GRMZM2G029850 I
GRMZM2G057408 Zea mays GRMZM2G057408 I
GRMZM2G118693 Zea mays GRMZM2G118693 I
GRMZM2G170148 Zea mays GRMZM2G170148 I
GRMZM2G170322 Zea mays GRMZM2G170322 I
GRMZM2G175265 Zea mays GRMZM2G175265 I