Pavir.Gb00055 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Gb00055 T289221_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb00055.1.p Myb 125 170

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.000
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I 0.000
BRADI3G02730 Brachypodium distachyon BRADI3G02730 I 0.000
Bo1g005460 Brassica oleracea Bo1g005460 I 0.000
Bra010572 Brassica rapa Bra010572 I 0.000
Bra011701 Brassica rapa Bra011701 I 0.000
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.000
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.000
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.000
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.000
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.000
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.000
MLOC_81641 Hordeum vulgare MLOC_81641 I 0.000
LPERR07G06120 Leersia perrieri LPERR07G06120 I 0.000
MDP0000231274 Malus domestica MDP0000231274 I 0.000
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.000
mgf008605m Mimulus guttatus mgf008605m I 0.000
OBART07G07070 Oryza barthii OBART07G07070 I 0.000
OB07G15280 Oryza brachyantha OB07G15280 I 0.000
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I 0.000
BGIOSGA025382 Oryza indica BGIOSGA025382 I 0.000
OLONG_021599 Oryza longistaminata OLONG_021599 I 0.000
OMERI07G05820 Oryza meridionalis OMERI07G05820 I 0.000
ONIVA07G05320 Oryza nivara ONIVA07G05320 I 0.000
OPUNC07G06790 Oryza punctata OPUNC07G06790 I 0.000
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I 0.000
OS07G0209800 Oryza sativa OS07G0209800 I 0.000
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I 0.000
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I 0.000
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.000
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.000
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.000
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.000
Si030123m.g Setaria italica Si030123m.g I 0.000
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.000
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.000
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.000
Sb02g006350 Sorghum bicolor Sb02g006350 I 0.000
Traes_6BS_05264DAEA Triticum aestivum Traes_6BS_05264DAEA I 0.000
HBP1A_WHEAT Triticum aestivum HBP1A_WHEAT D 0.000
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I 0.000
TRIUR3_31142 Triticum urartu TRIUR3_31142 I 0.000
TRIUR3_18117 Triticum urartu TRIUR3_18117 I 0.000
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.000
GRMZM2G171370 Zea mays GRMZM2G171370 I 0.000
GRMZM2G095078 Zea mays GRMZM2G095078 I 0.000