CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10013531m.g
(
Eutrema salsugineum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Thhalv10013531m.g
T290032_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TRFL5
M02285_2.00
Arabidopsis thaliana
WGCCCTAN
NTAGGGCW
PBM
Weirauch et al.(2014)
pTH7099
0.774
0.804
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10013531m
Myb
398
447
KKFWTPEEEKALREGVKEYGKSWKDIKNANPAVLGERTEVDLKDKWRNLV
Thhalv10013541m
Myb
396
445
KKFWTPEEEKALREGVKEYGKSWKDIKNANPAVLGERTEVDLKDKWRNLV
Thhalv10013542m
Myb
396
445
KKFWTPEEEKALREGVKEYGKSWKDIKNANPAVLGERTEVDLKDKWRNLV
Links
Other
Myb/SANT
family TFs
Other
Eutrema salsugineum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action