chr4.CM0831.100.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr4.CM0831.100.nd T290720_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.793 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0831.100.nd Myb 289 339

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N
HMGB1 Bos taurus ENSBTAG00000014862 N
ENSCJAG00000007095 Callithrix jacchus ENSCJAG00000007095 N
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N
ENSCJAG00000014197 Callithrix jacchus ENSCJAG00000014197 N
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N
ENSCAFG00000023930 Canis familiaris ENSCAFG00000023930 N
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N
hmgb2a Danio rerio ENSDARG00000029722 N
hmgb1a Danio rerio ENSDARG00000099175 N
ENSDNOG00000047452 Dasypus novemcinctus ENSDNOG00000047452 N
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N
ENSDNOG00000042649 Dasypus novemcinctus ENSDNOG00000042649 N
ENSDNOG00000041663 Dasypus novemcinctus ENSDNOG00000041663 N
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N
ENSGGOG00000007804 Gorilla gorilla ENSGGOG00000007804 N
ENSGGOG00000025109 Gorilla gorilla ENSGGOG00000025109 N
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N
ENSMMUP00000039817 Macaca fascicularis ENSMMUP00000039817 N
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N
ENSMMUG00000002662 Macaca mulatta ENSMMUG00000002662 N
ENSMMUG00000019832 Macaca mulatta ENSMMUG00000019832 N
HMGB2 Macaca mulatta ENSMMUG00000020008 N
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N
HMGB1 Microcebus murinus ENSMICG00000006213 N
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N
HMGB1 Monodelphis domestica ENSMODG00000004443 N
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N
ENSOGAG00000034801 Otolemur garnettii ENSOGAG00000034801 N
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N
ENSOGAG00000032325 Otolemur garnettii ENSOGAG00000032325 N
ENSOGAG00000032240 Otolemur garnettii ENSOGAG00000032240 N
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N
ENSOGAG00000029748 Otolemur garnettii ENSOGAG00000029748 N
ENSOGAG00000030563 Otolemur garnettii ENSOGAG00000030563 N
ENSOGAG00000028737 Otolemur garnettii ENSOGAG00000028737 N
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N
ENSOGAG00000024497 Otolemur garnettii ENSOGAG00000024497 N
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N
ENSOGAG00000030052 Otolemur garnettii ENSOGAG00000030052 N
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N
ENSOARG00000019147 Ovis aries ENSOARG00000019147 N
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N
RGD1563668 Rattus norvegicus ENSRNOG00000038478 N
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N
AABR07019870.1 Rattus norvegicus ENSRNOG00000038033 N
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N
Hmgb1-ps3 Rattus norvegicus ENSRNOG00000032420 N
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N
hmgb1a Takifugu rubripes ENSTRUG00000008452 N
ENSTSYG00000012587 Tarsius syrichta ENSTSYG00000012587 N
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N
ENSTBEG00000015758 Tupaia belangeri ENSTBEG00000015758 N
ENSTBEG00000015340 Tupaia belangeri ENSTBEG00000015340 N
ENSTBEG00000014925 Tupaia belangeri ENSTBEG00000014925 N
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N
ENSTBEG00000005706 Tupaia belangeri ENSTBEG00000005706 N
AAC59859 Xenopus laevis AAC59859 N
AAH73449 Xenopus laevis AAH73449 N
BAA06440 Xenopus laevis BAA06440 N
hmgb2.S Xenopus laevis XB-GENE-1000251 N
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N