CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM5G857701
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM5G857701
T293315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC001
M00969_2.00
Arabidopsis thaliana
NYACGBHANN
NNTDVCGTRN
PBM
Lindemose et al.(2014)
FL092
0.891
0.381
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM5G857701_P01
NAC/NAM
11
148
PPGFRFYPSDEELVCHYLHGKVANERLAGAGAAMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSGYWKATGKDRVIHTPCSRPAAGGGHHRAVVGMRKTLVFYRGRAPNGVKTSWVMHEFRM
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WRKY62
Arabidopsis lyrata
Al_scaffold_0006_13
I
0.000
WRKY67
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000969
I
0.000
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
0.000
Al_scaffold_0002_1233
Arabidopsis lyrata
Al_scaffold_0002_1233
I
0.000
WRKY63
Arabidopsis thaliana
AT1G66600
D
0.000
WRKY66
Arabidopsis thaliana
AT1G80590
I
0.000
WRKY62
Arabidopsis thaliana
AT5G01900
D
0.000
WRKY38
Arabidopsis thaliana
AT5G22570
D
0.000
WRKY64
Arabidopsis thaliana
AT1G66560
I
0.000
WRKY67
Arabidopsis thaliana
AT1G66550
I
0.000
Bostr.26959s0262
Boechera stricta
Bostr.26959s0262
I
0.000
Bostr.26959s0261
Boechera stricta
Bostr.26959s0261
I
0.000
Bostr.26959s0259
Boechera stricta
Bostr.26959s0259
I
0.000
Bostr.26527s0018
Boechera stricta
Bostr.26527s0018
I
0.000
Bostr.25463s0359
Boechera stricta
Bostr.25463s0359
I
0.000
Bostr.20129s0455
Boechera stricta
Bostr.20129s0455
I
0.000
Bostr.6251s0160
Boechera stricta
Bostr.6251s0160
I
0.000
Bostr.5022s0087
Boechera stricta
Bostr.5022s0087
I
0.000
Bo01002s040
Brassica oleracea
Bo01002s040
I
0.000
Bo2g024040
Brassica oleracea
Bo2g024040
I
0.000
Bo2g095820
Brassica oleracea
Bo2g095820
I
0.000
Bo5g068250
Brassica oleracea
Bo5g068250
I
0.000
Bra023211
Brassica rapa
Bra023211
I
0.000
Bra020197
Brassica rapa
Bra020197
I
0.000
Bra008459
Brassica rapa
Bra008459
I
0.000
Bra008456
Brassica rapa
Bra008456
I
0.000
Bra008454
Brassica rapa
Bra008454
I
0.000
Bra002421
Brassica rapa
Bra002421
I
0.000
Bra020196
Brassica rapa
Bra020196
I
0.000
Bra028918
Brassica rapa
Bra028918
I
0.000
Cagra.0255s0014
Capsella grandiflora
Cagra.0255s0014
I
0.000
Cagra.15225s0001
Capsella grandiflora
Cagra.15225s0001
I
0.000
Cagra.20277s0001
Capsella grandiflora
Cagra.20277s0001
I
0.000
Cagra.8153s0001
Capsella grandiflora
Cagra.8153s0001
I
0.000
Carubv10002472m.g
Capsella rubella
Carubv10002472m.g
I
0.000
Carubv10012720m.g
Capsella rubella
Carubv10012720m.g
I
0.000
Carubv10021420m.g
Capsella rubella
Carubv10021420m.g
I
0.000
Carubv10021860m.g
Capsella rubella
Carubv10021860m.g
I
0.000
Carubv10021899m.g
Capsella rubella
Carubv10021899m.g
I
0.000
Carubv10022120m.g
Capsella rubella
Carubv10022120m.g
I
0.000
Carubv10022162m.g
Capsella rubella
Carubv10022162m.g
I
0.000
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
0.000
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.000
Ca_18932
Cicer arietinum
Ca_18932
I
0.000
Cucsa.177060
Cucumis sativus
Cucsa.177060
I
0.000
Eucgr.K01289
Eucalyptus grandis
Eucgr.K01289
I
0.000
Thhalv10000686m.g
Eutrema salsugineum
Thhalv10000686m.g
I
0.000
Thhalv10014700m.g
Eutrema salsugineum
Thhalv10014700m.g
I
0.000
Thhalv10029232m.g
Eutrema salsugineum
Thhalv10029232m.g
I
0.000
gene13547-v1.0-hybrid
Fragaria vesca
gene13547-v1.0-hybrid
I
0.000
LPERR05G06630
Leersia perrieri
LPERR05G06630
I
0.000
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.000
MTR_8g005750
Medicago truncatula
MTR_8g005750
I
0.000
mgf002542m
Mimulus guttatus
mgf002542m
I
0.000
mgf009193m
Mimulus guttatus
mgf009193m
I
0.000
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
0.000
OBART05G08130
Oryza barthii
OBART05G08130
I
0.000
OB05G17240
Oryza brachyantha
OB05G17240
I
0.000
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
0.000
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
0.000
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
0.000
OLONG_019907
Oryza longistaminata
OLONG_019907
I
0.000
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
0.000
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
0.000
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
0.000
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
0.000
Pm003014
Prunus mume
Pm003014
I
0.000
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
0.000
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.000