CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr3G13880_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_Achr3G13880_001
T293374_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH
DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.970
0.946
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD
HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.970
0.946
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA
TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.949
0.839
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.945
0.786
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.945
0.786
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW
WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.941
0.768
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.933
0.768
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.933
0.768
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY
RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.927
0.732
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr3P13880_001
NAC/NAM
7
133
PPGFRFHPTDEELVNYYLKRKIHGLKIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVCSQNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
215 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL014151
Aedes aegypti
AAEL014151
N
ADIR001850
Anopheles dirus
ADIR001850
N
AMIN008765
Anopheles minimus
AMIN008765
N
ASTEI11594
Anopheles stephensi
ASTEI11594
N
ENSP00000216513-D1
Bos grunniens
ENSP00000216513-D1
N
DILT_0000658401
Diphyllobothrium latum
DILT_0000658401
N
ECPE_0000004201
Echinostoma caproni
ECPE_0000004201
N
HCOI00435100
Haemonchus contortus
HCOI00435100
N
HCOI01447600
Haemonchus contortus
HCOI01447600
N
SNAPOd2T00003146001
Oikopleura dioica
SNAPOd2T00003146001
N
PPAI009697
Phlebotomus papatasi
PPAI009697
N
PXEA_0002543701
Protopolystoma xenopodis
PXEA_0002543701
N