CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf016848m
(
Mimulus guttatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
mgf016848m
T297096_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.911
0.848
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.911
0.848
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.911
0.848
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.911
0.848
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf016848m
NAC/NAM
12
136
PPGFRFHPTDEELIVYYLRNQASSNPCPVSVIHEIDIYKFDPWELPEKAEVGEKEWYFFSPRDRKYPNGARPNRAAVSGYWKATGTDKGIYSGSKYVGVKKSLVFYKGKPPKGIKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Mimulus guttatus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK07396.1
Cannabis sativa
PK07396.1
N
MLOC_70503
Hordeum vulgare
MLOC_70503
N
OB0245G10010
Oryza brachyantha
OB0245G10010
N
OGLUM02G07340
Oryza glumaepatula
OGLUM02G07340
N
OGLUM05G19360
Oryza glumaepatula
OGLUM05G19360
N
BGIOSGA019943
Oryza indica
BGIOSGA019943
N
OMERI05G15970
Oryza meridionalis
OMERI05G15970
N
ONIVA02G08940
Oryza nivara
ONIVA02G08940
N
ONIVA05G19190
Oryza nivara
ONIVA05G19190
N
OPUNC02G06490
Oryza punctata
OPUNC02G06490
N
OPUNC05G16080
Oryza punctata
OPUNC05G16080
N
Solyc06g074360.2
Solanum lycopersicum
Solyc06g074360.2
N
PGSC0003DMG400030271
Solanum tuberosum
PGSC0003DMG400030271
N
Traes_5AL_78701B16C
Triticum aestivum
Traes_5AL_78701B16C
N
Traes_7AS_9671D35EF
Triticum aestivum
Traes_7AS_9671D35EF
N
TRIUR3_33088
Triticum urartu
TRIUR3_33088
N