Gorai.008G179900 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.008G179900 T298126_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.945 0.833
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.945 0.833
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.945 0.833
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.945 0.833
Traes_5BL_CC18CAD72
M11085_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC691_01 		0.887 0.781
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G179900.1 NAC/NAM 12 136
Gorai.008G179900.2 NAC/NAM 12 136

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_26965 Aegilops tauschii F775_26965 I 0.887
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.872
Aquca_002_00663 Aquilegia coerulea Aquca_002_00663 I 0.937
NAP Arabidopsis lyrata fgenesh2_kg.2__1206__AT1G69490.1 I 0.945
NAC029 Arabidopsis thaliana AT1G69490 D 0.945
Bostr.10273s0418 Boechera stricta Bostr.10273s0418 I 0.945
Bo6g095510 Brassica oleracea Bo6g095510 I 0.942
Bo6g108930 Brassica oleracea Bo6g108930 I 0.942
Bra004385 Brassica rapa Bra004385 I 0.942
PK25119.1 Cannabis sativa PK25119.1 I 0.967
Cagra.0887s0008 Capsella grandiflora Cagra.0887s0008 I 0.945
Carubv10020776m.g Capsella rubella Carubv10020776m.g I 0.945
evm.TU.supercontig_1.48 Carica papaya evm.TU.supercontig_1.48 I 0.946
Ca_16379 Cicer arietinum Ca_16379 I 0.949
Ca_18090 Cicer arietinum Ca_18090 I 0.944
Cla010367 Citrullus lanatus Cla010367 I 0.960
Ciclev10032304m.g Citrus clementina Ciclev10032304m.g I 0.963
orange1.1g023197m.g Citrus sinensis orange1.1g023197m.g I 0.963
Cucsa.284890 Cucumis sativus Cucsa.284890 I 0.960
Eucgr.G02486 Eucalyptus grandis Eucgr.G02486 I 0.963
Eucgr.B03208 Eucalyptus grandis Eucgr.B03208 I 0.923
Thhalv10018997m.g Eutrema salsugineum Thhalv10018997m.g I 0.945
GLYMA01G06150 Glycine max GLYMA01G06150 I 0.953
GLYMA20G04400 Glycine max GLYMA20G04400 I 0.961
GLYMA07G35630 Glycine max GLYMA07G35630 I 0.959
GLYMA02G12220 Glycine max GLYMA02G12220 I 0.950
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I 0.968
MLOC_4747 Hordeum vulgare MLOC_4747 I 0.887
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.928
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.928
Lus10036773.g Linum usitatissimum Lus10036773.g I 0.964
Lus10037156.g Linum usitatissimum Lus10037156.g I 0.960
chr2.CM0641.320.nc Lotus japonicus chr2.CM0641.320.nc I 0.902
MDP0000262990 Malus domestica MDP0000262990 I 0.960
MDP0000481448 Malus domestica MDP0000481448 I 0.964
cassava1317.valid.m1 Manihot esculenta cassava1317.valid.m1 I 0.965
MTR_4g081870 Medicago truncatula MTR_4g081870 I 0.960
MTR_5g041940 Medicago truncatula MTR_5g041940 I 0.933
mgf016848m Mimulus guttatus mgf016848m I 0.943
mgf022118m Mimulus guttatus mgf022118m I 0.966
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.891
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.874
OBART11G01590 Oryza barthii OBART11G01590 I 0.874
OBART12G01290 Oryza barthii OBART12G01290 I 0.874
OB11G11210 Oryza brachyantha OB11G11210 I 0.884
OB12G11500 Oryza brachyantha OB12G11500 I 0.886
ORGLA12G0011400 Oryza glaberrima ORGLA12G0011400 I 0.874
OGLUM11G01310 Oryza glumaepatula OGLUM11G01310 I 0.874
OGLUM12G01870 Oryza glumaepatula OGLUM12G01870 I 0.874
BGIOSGA034713 Oryza indica BGIOSGA034713 I 0.874
BGIOSGA036920 Oryza indica BGIOSGA036920 I 0.872
BGIOSGA036918 Oryza indica BGIOSGA036918 I 0.874
OLONG_026749 Oryza longistaminata OLONG_026749 I 0.872
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.878
ONIVA11G01630 Oryza nivara ONIVA11G01630 I 0.874
OPUNC12G01370 Oryza punctata OPUNC12G01370 I 0.894
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.894
OS11G0126900 Oryza sativa OS11G0126900 I 0.874
OS12G0123700 Oryza sativa OS12G0123700 I 0.872
Pavir.J23516 Panicum virgatum Pavir.J23516 I 0.879
POPTR_0008s08850 Populus trichocarpa POPTR_0008s08850 I 0.961
POPTR_0010s17350 Populus trichocarpa POPTR_0010s17350 I 0.933
Pm006470 Prunus mume Pm006470 I 0.965
PRUPE_ppa009530mg Prunus persica PRUPE_ppa009530mg I 0.965
29813.m001519 Ricinus communis 29813.m001519 I 0.963
SapurV1A.0063s0610 Salix purpurea SapurV1A.0063s0610 I 0.942
SapurV1A.0063s0620 Salix purpurea SapurV1A.0063s0620 I 0.942
SapurV1A.0801s0090 Salix purpurea SapurV1A.0801s0090 I 0.962
Si032676m.g Setaria italica Si032676m.g I 0.874
Si026530m.g Setaria italica Si026530m.g I 0.884
Si010410m.g Setaria italica Si010410m.g I 0.887
Solyc05g007770.2 Solanum lycopersicum Solyc05g007770.2 I 0.956
Solyc04g005610.2 Solanum lycopersicum Solyc04g005610.2 I 0.950
PGSC0003DMG400002824 Solanum tuberosum PGSC0003DMG400002824 I 0.959
PGSC0003DMG400018435 Solanum tuberosum PGSC0003DMG400018435 I 0.960
Sb08g001940 Sorghum bicolor Sb08g001940 I 0.882
Sb05g001580 Sorghum bicolor Sb05g001580 I 0.885
TCM_011671 Theobroma cacao TCM_011671 I 0.952
Traes_5BL_CC18CAD72 Triticum aestivum Traes_5BL_CC18CAD72 D 0.887
NAP Vitis vinifera VIT_01s0026g02710 I 0.966