CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g023427m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g023427m.g
T298670_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g023427m
NAC/NAM
7
134
LPGFRFHPTEDELLNFYLRNIVFGKKSHFDIIGFLNIYHHDPWELPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTEHGFWKATGSDRKIVSLSDPKRVIGLRKTLVFYEGRAPKGHKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG809187
Hyaloperonospora arabidopsidis
HpaG809187
N
0.000
e_gw1.8.191.1
Phytophthora capsici
e_gw1.8.191.1
N
0.000
PITG_18326
Phytophthora infestans
PITG_18326
N
0.000
fgenesh_scip_prom.46568.5776
Phytophthora kernoviae
fgenesh_scip_prom.46568.5776
N
0.000
Phyra75979
Phytophthora ramorum
Phyra75979
N
0.000
Physo132607
Phytophthora sojae
Physo132607
N
0.000
maker-pag1_scaffold_171-fgenesh-gene-0.6
Pythium aphanidermatum
maker-pag1_scaffold_171-fgenesh-gene-0.6
N
0.000
maker-par_contig_5732-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5732-fgenesh-gene-0.0
N
0.000
maker-pir_contig_342-snap-gene-0.19
Pythium irregulare
maker-pir_contig_342-snap-gene-0.19
N
0.000
PYU1_G005035
Pythium ultimum
PYU1_G005035
N
0.000