Pavir.J34679 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J34679 T299006_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC001
M00969_2.00 		Arabidopsis thaliana
NYACGBHANN
NNTDVCGTRN		 PBM
Lindemose et al.(2014)
FL092 		0.875 0.374
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J34679.1.p NAC/NAM 11 141

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08585 Aegilops tauschii F775_08585 N 0.951
F775_17109 Aegilops tauschii F775_17109 N 0.951
NAC001 Arabidopsis thaliana AT1G01010 D 0.875
BRADI3G54817 Brachypodium distachyon BRADI3G54817 N 0.990
BRADI5G15587 Brachypodium distachyon BRADI5G15587 N 0.883
PK19051.1 Cannabis sativa PK19051.1 N 0.880
Eucgr.K03256 Eucalyptus grandis Eucgr.K03256 N 0.899
gene08112-v1.0-hybrid Fragaria vesca gene08112-v1.0-hybrid N 0.881
GLYMA13G18620 Glycine max GLYMA13G18620 N 0.881
GLYMA19G34881 Glycine max GLYMA19G34881 N 0.885
GLYMA10G04350 Glycine max GLYMA10G04350 N 0.881
GLYMA03G32116 Glycine max GLYMA03G32116 N 0.873
Gorai.001G254300 Gossypium raimondii Gorai.001G254300 N 0.871
Gorai.001G178800 Gossypium raimondii Gorai.001G178800 N 0.875
Gorai.007G147300 Gossypium raimondii Gorai.007G147300 N 0.882
MLOC_5165 Hordeum vulgare MLOC_5165 N 0.952
MLOC_12466 Hordeum vulgare MLOC_12466 N 0.883
LPERR02G30240 Leersia perrieri LPERR02G30240 I 0.986
MDP0000697030 Malus domestica MDP0000697030 N 0.877
MTR_7g097090 Medicago truncatula MTR_7g097090 N 0.875
mgf018312m Mimulus guttatus mgf018312m N 0.899
GSMUA_Achr1G10860_001 Musa acuminata GSMUA_Achr1G10860_001 N 0.894
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N 0.907
GSMUA_Achr5G18670_001 Musa acuminata GSMUA_Achr5G18670_001 N 0.914
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N 0.912
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N 0.884
GSMUA_Achr11G00880_001 Musa acuminata GSMUA_Achr11G00880_001 N 0.905
GSMUA_Achr8G18980_001 Musa acuminata GSMUA_Achr8G18980_001 N 0.894
OBART02G36830 Oryza barthii OBART02G36830 N 0.933
OBART06G24550 Oryza barthii OBART06G24550 N 0.882
OBART04G18700 Oryza barthii OBART04G18700 N 0.897
OB04G25790 Oryza brachyantha OB04G25790 N 0.897
OB02G43380 Oryza brachyantha OB02G43380 N 0.933
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N 0.882
ORGLA04G0158100 Oryza glaberrima ORGLA04G0158100 N 0.897
ORGLA02G0320500 Oryza glaberrima ORGLA02G0320500 N 0.933
OGLUM02G38020 Oryza glumaepatula OGLUM02G38020 I 0.987
OGLUM04G18750 Oryza glumaepatula OGLUM04G18750 N 0.897
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N 0.882
BGIOSGA009257 Oryza indica BGIOSGA009257 N 0.933
BGIOSGA023457 Oryza indica BGIOSGA023457 N 0.882
BGIOSGA016756 Oryza indica BGIOSGA016756 N 0.897
BGIOSGA014342 Oryza indica BGIOSGA014342 N 0.912
OLONG_011232 Oryza longistaminata OLONG_011232 N 0.893
OMERI06G24740 Oryza meridionalis OMERI06G24740 N 0.882
OMERI02G34720 Oryza meridionalis OMERI02G34720 N 0.933
ONIVA02G39640 Oryza nivara ONIVA02G39640 N 0.933
ONIVA02G35380 Oryza nivara ONIVA02G35380 N 0.882
ONIVA04G01950 Oryza nivara ONIVA04G01950 N 0.897
OPUNC06G22270 Oryza punctata OPUNC06G22270 N 0.872
OPUNC02G33860 Oryza punctata OPUNC02G33860 N 0.933
OPUNC04G16450 Oryza punctata OPUNC04G16450 N 0.897
ORUFI02G38340 Oryza rufipogon ORUFI02G38340 N 0.933
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N 0.882
ORUFI04G27160 Oryza rufipogon ORUFI04G27160 N 0.923
ORUFI04G20200 Oryza rufipogon ORUFI04G20200 N 0.897
OS02G0810900 Oryza sativa OS02G0810900 N 0.933
OS04G0515900 Oryza sativa OS04G0515900 N 0.897
OS06G0675600 Oryza sativa OS06G0675600 N 0.882
Pavir.J11268 Panicum virgatum Pavir.J11268 N 0.904
Pavir.Ib03261 Panicum virgatum Pavir.Ib03261 N 0.928
Pavir.Gb00655 Panicum virgatum Pavir.Gb00655 N 0.898
Pavir.Ga01251 Panicum virgatum Pavir.Ga01251 N 0.897
Pavir.Ab02337 Panicum virgatum Pavir.Ab02337 N 0.900
Pavir.Aa01668 Panicum virgatum Pavir.Aa01668 N 0.905
Pavir.Aa00144 Panicum virgatum Pavir.Aa00144 I 0.995
PDK_20s1301681g003 Phoenix dactylifera PDK_20s1301681g003 N 0.917
PDK_20s1648061g001 Phoenix dactylifera PDK_20s1648061g001 N 0.884
Pm020580 Prunus mume Pm020580 N 0.877
PRUPE_ppa009628mg Prunus persica PRUPE_ppa009628mg N 0.877
Si010799m.g Setaria italica Si010799m.g N 0.890
Si017967m.g Setaria italica Si017967m.g I 0.994
Si018001m.g Setaria italica Si018001m.g N 0.904
Si036835m.g Setaria italica Si036835m.g N 0.929
Solyc06g008360.2 Solanum lycopersicum Solyc06g008360.2 N 0.874
Solyc09g025310.2 Solanum lycopersicum Solyc09g025310.2 N 0.872
PGSC0003DMG400020147 Solanum tuberosum PGSC0003DMG400020147 N 0.889
Sb04g026440 Sorghum bicolor Sb04g026440 N 0.904
Sb04g036640 Sorghum bicolor Sb04g036640 I 0.994
TCM_003998 Theobroma cacao TCM_003998 N 0.871
Traes_6AL_B92597EA9 Triticum aestivum Traes_6AL_B92597EA9 N 0.953
Traes_2BL_D718E27A9 Triticum aestivum Traes_2BL_D718E27A9 N 0.878
Traes_6DL_8A1342D56 Triticum aestivum Traes_6DL_8A1342D56 N 0.951
Traes_6DL_1ABE78799 Triticum aestivum Traes_6DL_1ABE78799 N 0.951
Traes_6BL_D00F04562 Triticum aestivum Traes_6BL_D00F04562 I 0.992
Traes_6BL_99F790D57 Triticum aestivum Traes_6BL_99F790D57 N 0.951
Traes_6AL_B272C86BE Triticum aestivum Traes_6AL_B272C86BE N 0.943
TRIUR3_33179 Triticum urartu TRIUR3_33179 N 0.878
TRIUR3_32754 Triticum urartu TRIUR3_32754 N 0.953
TRIUR3_23299 Triticum urartu TRIUR3_23299 N 0.943
GRMZM2G043813 Zea mays GRMZM2G043813 N 0.876
GRMZM2G062009 Zea mays GRMZM2G062009 N 0.897
GRMZM2G081930 Zea mays GRMZM2G081930 N 0.893
GRMZM2G140901 Zea mays GRMZM2G140901 I 0.992
GRMZM5G857701 Zea mays GRMZM5G857701 I 0.991