Thhalv10002040m.g (Eutrema salsugineum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Thhalv10002040m.g T299203_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NTL8
M00975_2.00 		Arabidopsis thaliana
TWNCYYHNNN
NNNDRRGNWA		 PBM
Lindemose et al.(2014)
NTL8 		0.913 0.816
NTL8
M07190_2.00 		Arabidopsis thaliana
NTTNCTTCDHNNNNARGNA
TNCYTNNNNDHGAAGNAAN		 Dap-seq
OMalley et al.(2016)
NTL8_col 		0.913 0.816
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002040m NAC/NAM 15 137

Links

Other NAC/NAM family TFs
Other Eutrema salsugineum TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac089 Arabidopsis lyrata scaffold_602275.1 N 0.918
ANAC040 Arabidopsis lyrata fgenesh2_kg.4__689__AT2G27300.1 I 0.986
anac060 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000902 N 0.935
NAC60 Arabidopsis thaliana AT3G44290 N 0.938
NTL8 Arabidopsis thaliana AT2G27300 D 0.913
NAC089 Arabidopsis thaliana AT5G22290 N 0.919
Bostr.26527s0049 Boechera stricta Bostr.26527s0049 N 0.918
Bostr.0556s0726 Boechera stricta Bostr.0556s0726 N 0.912
Bo4g075560 Brassica oleracea Bo4g075560 I 0.922
Bo1g063720 Brassica oleracea Bo1g063720 N 0.938
Bo2g023820 Brassica oleracea Bo2g023820 N 0.944
Bo3g016820 Brassica oleracea Bo3g016820 I 0.935
Bra021471 Brassica rapa Bra021471 N 0.944
Bra020182 Brassica rapa Bra020182 N 0.944
Bra012024 Brassica rapa Bra012024 I 0.922
Bra006619 Brassica rapa Bra006619 I 0.935
Bra002403 Brassica rapa Bra002403 N 0.941
Cagra.3125s0012 Capsella grandiflora Cagra.3125s0012 I 0.912
Cagra.0846s0004 Capsella grandiflora Cagra.0846s0004 N 0.918
Carubv10023568m.g Capsella rubella Carubv10023568m.g I 0.912
Carubv10019187m.g Capsella rubella Carubv10019187m.g N 0.948
Carubv10001357m.g Capsella rubella Carubv10001357m.g N 0.918
evm.TU.supercontig_195.35 Carica papaya evm.TU.supercontig_195.35 N 0.922
Ciclev10028618m.g Citrus clementina Ciclev10028618m.g N 0.920
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.898
Thhalv10002027m.g Eutrema salsugineum Thhalv10002027m.g I 0.989
Thhalv10002300m.g Eutrema salsugineum Thhalv10002300m.g I 0.889
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I 0.892
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.873
Gorai.006G113700 Gossypium raimondii Gorai.006G113700 N 0.927
Gorai.009G083500 Gossypium raimondii Gorai.009G083500 N 0.928
Lus10005204.g Linum usitatissimum Lus10005204.g N 0.881
Lus10013316.g Linum usitatissimum Lus10013316.g N 0.881
Lus10034183.g Linum usitatissimum Lus10034183.g N 0.903
Lus10043402.g Linum usitatissimum Lus10043402.g N 0.903
cassava16016.m1 Manihot esculenta cassava16016.m1 N 0.920
POPTR_0009s16290 Populus trichocarpa POPTR_0009s16290 N 0.935
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.897
30055.m001612 Ricinus communis 30055.m001612 N 0.920
SapurV1A.0561s0300 Salix purpurea SapurV1A.0561s0300 N 0.929
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I 0.900
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I 0.890
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I 0.890
PGSC0003DMG400005892 Solanum tuberosum PGSC0003DMG400005892 I 0.898
TCM_041332 Theobroma cacao TCM_041332 N 0.923