Carubv10003051m.g (Capsella rubella)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Carubv10003051m.g T300960_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003051m NFX 195 212
Carubv10003051m NFX 230 265
Carubv10003051m NFX 300 318
Carubv10003051m NFX 354 373
Carubv10003051m NFX 407 425
Carubv10003051m NFX 428 452
Carubv10003051m NFX 499 511
Carubv10003051m NFX 520 531
Carubv10003051m NFX 602 613
Carubv10003051m NFX 643 660
Carubv10003051m NFX 706 726

Links

Other NFX family TFs
Other Capsella rubella TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05071 Aegilops tauschii F775_05071 N
BRADI1G61110 Brachypodium distachyon BRADI1G61110 N
MLOC_72614 Hordeum vulgare MLOC_72614 N
LPERR03G16670 Leersia perrieri LPERR03G16670 N
OBART03G19370 Oryza barthii OBART03G19370 N
OB03G28630 Oryza brachyantha OB03G28630 N
ORGLA03G0182200 Oryza glaberrima ORGLA03G0182200 N
OGLUM03G19940 Oryza glumaepatula OGLUM03G19940 N
BGIOSGA012750 Oryza indica BGIOSGA012750 N
OMERI03G17460 Oryza meridionalis OMERI03G17460 N
OMERI03G17430 Oryza meridionalis OMERI03G17430 N
ONIVA03G20030 Oryza nivara ONIVA03G20030 N
ORUFI03G20000 Oryza rufipogon ORUFI03G20000 N
OS03G0379300 Oryza sativa OS03G0379300 N
Pavir.Ia03149 Panicum virgatum Pavir.Ia03149 N
Pavir.J37675 Panicum virgatum Pavir.J37675 N
Si037016m.g Setaria italica Si037016m.g N
Traes_2AS_9AEA9BDEA Triticum aestivum Traes_2AS_9AEA9BDEA N
Traes_2BS_8A40B568C Triticum aestivum Traes_2BS_8A40B568C N
Traes_2DS_FE62DB7F5 Triticum aestivum Traes_2DS_FE62DB7F5 N
GRMZM2G350312 Zea mays GRMZM2G350312 N