CRE25188 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE25188 T302277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr83
M06434_2.00 		Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY		 B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436 		0.806 0.614
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.753 0.614
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.753 0.614
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.753 0.614
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.753 0.614
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.753 0.614
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.753 0.614
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.753 0.614
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.753 0.614
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.753 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE25188 Nuclear receptor 22 92

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.000
AAEL011380 Aedes aegypti AAEL011380 N 0.000
AALB006743 Anopheles albimanus AALB006743 N 0.000
AARA010318 Anopheles arabiensis AARA010318 N 0.000
AATE018776 Anopheles atroparvus AATE018776 N 0.000
ACUA021022 Anopheles culicifacies ACUA021022 N 0.000
ADAC001494 Anopheles darlingi ADAC001494 N 0.000
ADIR011701 Anopheles dirus ADIR011701 N 0.000
AEPI002924 Anopheles epiroticus AEPI002924 N 0.000
AFAF003948 Anopheles farauti AFAF003948 N 0.000
AFUN010134 Anopheles funestus AFUN010134 N 0.000
AGAP000005 Anopheles gambiae AGAP000005 N 0.000
AMAM015540 Anopheles maculatus AMAM015540 N 0.000
AMEC021909 Anopheles melas AMEC021909 N 0.000
AMEM017336 Anopheles merus AMEM017336 N 0.000
AMIN005344 Anopheles minimus AMIN005344 N 0.000
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.000
ASIS000124 Anopheles sinensis ASIS000124 N 0.000
ACEP16613 Atta cephalotes ACEP16613 N 0.000
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.000
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.000
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.000
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.000
GF19115 Drosophila ananassae FBgn0096126 N 0.000
GG17955 Drosophila erecta FBgn0110175 N 0.000
GH12282 Drosophila grimshawi FBgn0119761 N 0.000
Dsp1 Drosophila melanogaster FBgn0011764 N 0.000
GI10980 Drosophila mojavensis FBgn0133743 N 0.000
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.000
GD17278 Drosophila simulans FBgn0188840 N 0.000
GJ19445 Drosophila virilis FBgn0206588 N 0.000
GK25058 Drosophila willistoni FBgn0227017 N 0.000
GE17263 Drosophila yakuba FBgn0234741 N 0.000
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.000
HMEL007340 Heliconius melpomene HMEL007340 N 0.000
LCUP007363 Lucilia cuprina LCUP007363 N 0.000
MDOA008812 Musca domestica MDOA008812 N 0.000
NV15664 Nasonia vitripennis NV15664 N 0.000
RPRC006379 Rhodnius prolixus RPRC006379 N 0.000
SINV22586 Solenopsis invicta SINV22586 N 0.000