CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE30546
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE30546
T302315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-46
M00692_2.00
Caenorhabditis elegans
NNNDWNHRN
NYDNWHNNN
PBM
Narasimhan et al.(2015)
pTH9924
0.992
0.943
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE30546
Nuclear receptor
92
162
FECVGCGSESAIRVHYGASSCHGCKAFFRRSVFEGRVYMCSADNQCDITNESRNRCRACRLRNCLDGGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_07259
Beauveria bassiana
BBA_07259
N
0.000
Bcin10g04400
Botrytis cinerea
Bcin10g04400
N
0.000
Z519_04250
Cladophialophora bantiana
Z519_04250
N
0.000
A1O5_10088
Cladophialophora psammophila
A1O5_10088
N
0.000
CFIO01_13194
Colletotrichum fioriniae
CFIO01_13194
N
0.000
CGGC5_975
Colletotrichum gloeosporioides
CGGC5_975
N
0.000
GLRG_01306
Colletotrichum graminicola
GLRG_01306
N
0.000
CH063_12954
Colletotrichum higginsianum
CH063_12954
N
0.000
Cob_01758
Colletotrichum orbiculare
Cob_01758
N
0.000
CSUB01_05390
Colletotrichum sublineola
CSUB01_05390
N
0.000
HMPREF1120_08485
Exophiala dermatitidis
HMPREF1120_08485
N
0.000
PV05_05003
Exophiala xenobiotica
PV05_05003
N
0.000
FFUJ_12231
Fusarium fujikuroi
FFUJ_12231
N
0.000
FGRRES_01915
Fusarium graminearum
FGRRES_01915
N
0.000
FOXG_14431
Fusarium oxysporum
FOXG_14431
N
0.000
FOXG_15050
Fusarium oxysporum
FOXG_15050
N
0.000
FOXG_04220
Fusarium oxysporum
FOXG_04220
N
0.000
FPSE_09133
Fusarium pseudograminearum
FPSE_09133
N
0.000
NechaG50578
Fusarium solani
NechaG50578
N
0.000
FVEG_07339
Fusarium verticillioides
FVEG_07339
N
0.000
MAC_06449
Metarhizium acridum
MAC_06449
N
0.000
MBR_07492
Metarhizium brunneum
MBR_07492
N
0.000
MGU_03784
Metarhizium guizhouense
MGU_03784
N
0.000
MAJ_03662
Metarhizium majus
MAJ_03662
N
0.000
X797_003404
Metarhizium robertsii
X797_003404
N
0.000
e_gw1.14.618.1
Nectria haematococca
e_gw1.14.618.1
N
0.000
OIDMADRAFT_141697
Oidiodendron maius
OIDMADRAFT_141697
N
0.000
OCS_04024
Ophiocordyceps sinensis
OCS_04024
N
0.000
SNOG_13398
Phaeosphaeria nodorum
SNOG_13398
N
0.000
PODANS_2_2600
Podospora anserina
PODANS_2_2600
N
0.000
GMDG_02112
Pseudogymnoascus destructans
GMDG_02112
N
0.000
V499_07080
Pseudogymnoascus pannorum
V499_07080
N
0.000
SBOR_10075
Sclerotinia borealis
SBOR_10075
N
0.000
SS1G_12488
Sclerotinia sclerotiorum
SS1G_12488
N
0.000
SNOG_13398
Stagonospora nodorum
SNOG_13398
N
0.000
VHEMI10091
Torrubiella hemipterigena
VHEMI10091
N
0.000
GSTUM_00009849001
Tuber melanosporum
GSTUM_00009849001
N
0.000
VDBG_09326
Verticillium albo atrum
VDBG_09326
N
0.000
VDBG_09326
Verticillium alfalfae
VDBG_09326
N
0.000
VDAG_04562
Verticillium dahliae
VDAG_04562
N
0.000
YALI0_D21230g
Yarrowia lipolytica
YALI0_D21230g
N
0.000