kni (Drosophila melanogaster)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 FBgn0001320 T305271_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kni
M06419_2.00		 Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320		 (Direct) (Direct)
kni
M06420_2.00		 Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320		 (Direct) (Direct)
kni
M06421_2.00		 Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320		 (Direct) (Direct)
kni
M06557_2.00		 Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1		 (Direct) (Direct)
kni
M08225_2.00		 Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24		 (Direct) (Direct)
kni
M09687_2.00		 Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni		 (Direct) (Direct)
kni
M11189_2.00		 Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.983 0.871
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.981 0.857
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.981 0.857
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.981 0.857
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.958 0.800
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.958 0.800
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0077941 Nuclear receptor 3 73
FBpp0311151 Nuclear receptor 8 78

Links

Other Nuclear receptor family TFs
Other Drosophila melanogaster TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015013 Ailuropoda melanoleuca ENSAMEG00000015013 I
ENSAMEG00000019633 Ailuropoda melanoleuca ENSAMEG00000019633 I
Alligator_sinensis_CCG012594.1 Alligator sinensis Alligator_sinensis_CCG012594.1 I
ENSAPLG00000002295 Anas platyrhynchos ENSAPLG00000002295 I
Afo_R014889 Aptenodytes forsteri Afo_R014889 I
ENSAMXG00000026066 Astyanax mexicanus ENSAMXG00000026066 I
ENSAMXG00000026284 Astyanax mexicanus ENSAMXG00000026284 I
BGLB010755 Biomphalaria glabrata BGLB010755 I
ENSBTAP00000021340-D1 Bos grunniens ENSBTAP00000021340-D1 I
ENSP00000356708-D1 Bos grunniens ENSP00000356708-D1 I
OLIG3 Bos taurus ENSBTAG00000008749 I
Brh_R007937 Buceros rhinoceros Brh_R007937 I
OLIG2 Callithrix jacchus ENSCJAG00000009439 I
Aan_R009789 Calypte anna Aan_R009789 I
OLIG3 Canis familiaris ENSCAFG00000000265 I
OLIG2 Canis familiaris ENSCAFG00000028529 I
CapteG41307 Capitella teleta CapteG41307 I
CapteG65387 Capitella teleta CapteG65387 I
OLIG3 Cavia porcellus ENSCPOG00000007516 I
OLIG2 Cavia porcellus ENSCPOG00000011590 I
Cmyd_10005462 Chelonia mydas Cmyd_10005462 I
Cmyd_10011949 Chelonia mydas Cmyd_10011949 I
ENSCSAG00000000185 Chlorocebus sabaeus ENSCSAG00000000185 I
ENSCSAG00000018687 Chlorocebus sabaeus ENSCSAG00000018687 I
OLIG3 Choloepus hoffmanni ENSCHOG00000005165 I
CGI_10019998 Crassostrea gigas CGI_10019998 I
CGI_10023146 Crassostrea gigas CGI_10023146 I
olig2 Danio rerio ENSDARG00000040946 I
OLIG3 Dasypus novemcinctus ENSDNOG00000042405 I
OLIG2 Dasypus novemcinctus ENSDNOG00000047420 I
ENSDORG00000006743 Dipodomys ordii ENSDORG00000006743 I
Olig3 Dipodomys ordii ENSDORG00000013033 I
OLIG3 Echinops telfairi ENSETEG00000004562 I
ECPE_0001595001 Echinostoma caproni ECPE_0001595001 I
D915_09810 Fasciola hepatica D915_09810 I
OLIG3 Felis catus ENSFCAG00000030246 I
ENSFALG00000012862 Ficedula albicollis ENSFALG00000012862 I
ENSGMOG00000018006 Gadus morhua ENSGMOG00000018006 I
ENSGMOG00000018584 Gadus morhua ENSGMOG00000018584 I
OLIG3 Gallus gallus ENSGALG00000013862 I
ENSGALG00000027381 Gallus gallus ENSGALG00000027381 I
olig2 Gasterosteus aculeatus ENSGACG00000002152 I
OLIG3 Gasterosteus aculeatus ENSGACG00000010412 I
Gfo_R003786 Geospiza fortis Gfo_R003786 I
OLIG3 Gorilla gorilla ENSGGOG00000001516 I
OLIG2 Gorilla gorilla ENSGGOG00000008780 I
OLIG3 Homo sapiens ENSG00000177468 D
OLIG2 Homo sapiens ENSG00000205927 D
ENSSTOG00000020214 Ictidomys tridecemlineatus ENSSTOG00000020214 I
ENSSTOG00000020899 Ictidomys tridecemlineatus ENSSTOG00000020899 I
ENSLACG00000005047 Latimeria chalumnae ENSLACG00000005047 I
ENSLACG00000005481 Latimeria chalumnae ENSLACG00000005481 I
ENSLOCG00000017350 Lepisosteus oculatus ENSLOCG00000017350 I
ENSLOCG00000017506 Lepisosteus oculatus ENSLOCG00000017506 I
OLIG3 Loxodonta africana ENSLAFG00000005655 I
OLIG2 Loxodonta africana ENSLAFG00000028347 I
ENSP00000356708 Macaca fascicularis ENSP00000356708 I
OLIG2 Macaca mulatta ENSMMUG00000017652 I
ENSMMUG00000029441 Macaca mulatta ENSMMUG00000029441 I
ENSMEUG00000002914 Macropus eugenii ENSMEUG00000002914 I
ENSMICG00000004313 Microcebus murinus ENSMICG00000004313 I
OLIG3 Monodelphis domestica ENSMODG00000017418 I
OLIG2 Monodelphis domestica ENSMODG00000025338 I
ENSMPUG00000001227 Mustela putorius furo ENSMPUG00000001227 I
ENSMPUG00000018873 Mustela putorius furo ENSMPUG00000018873 I
Olig2 Mus musculus ENSMUSG00000039830 D
Olig3 Mus musculus ENSMUSG00000045591 D
Myotis_brandtii_OLIG3_10035715 Myotis brandtii Myotis_brandtii_OLIG3_10035715 I
OLIG3 Myotis lucifugus ENSMLUG00000026705 I
ENSNLEG00000019305 Nomascus leucogenys ENSNLEG00000019305 I
OLIG3 Ochotona princeps ENSOPRG00000003267 I
Ocbimv22001042m.g Octopus bimaculoides Ocbimv22001042m.g I
Ogr17936 Ophisaurus gracilis Ogr17936 I
ENSONIG00000017079 Oreochromis niloticus ENSONIG00000017079 I
ENSONIG00000020727 Oreochromis niloticus ENSONIG00000020727 I
OLIG3 Ornithorhynchus anatinus ENSOANG00000014796 I
OLIG3 Oryctolagus cuniculus ENSOCUG00000017289 I
olig2 Oryzias latipes ENSORLG00000010211 I
OLIG3 Otolemur garnettii ENSOGAG00000011977 I
OLIG2 Otolemur garnettii ENSOGAG00000026818 I
ENSOARG00000002572 Ovis aries ENSOARG00000002572 I
OLIG2 Pan troglodytes ENSPTRG00000013863 I
OLIG3 Pan troglodytes ENSPTRG00000018643 I
ENSPANG00000006465 Papio anubis ENSPANG00000006465 I
ENSPANG00000007664 Papio anubis ENSPANG00000007664 I
ENSPSIG00000001778 Pelodiscus sinensis ENSPSIG00000001778 I
ENSPSIG00000001988 Pelodiscus sinensis ENSPSIG00000001988 I
ENSPFOG00000004604 Poecilia formosa ENSPFOG00000004604 I
ENSPFOG00000015805 Poecilia formosa ENSPFOG00000015805 I
ENSPFOG00000019968 Poecilia formosa ENSPFOG00000019968 I
Pvit_10685 Pogona vitticeps Pvit_10685 I
Pvit_17282 Pogona vitticeps Pvit_17282 I
ENSPPYG00000011369 Pongo abelii ENSPPYG00000011369 I
ENSPPYG00000017041 Pongo abelii ENSPPYG00000017041 I
OLIG3 Procavia capensis ENSPCAG00000002488 I
Olig3 Rattus norvegicus ENSRNOG00000012057 I
Olig2 Rattus norvegicus ENSRNOG00000028658 I
Sakowv30018772m.g Saccoglossus kowalevskii Sakowv30018772m.g I
ENSSHAG00000007183 Sarcophilus harrisii ENSSHAG00000007183 I
OLIG3 Sus scrofa ENSSSCG00000004155 I
OLIG3 Taeniopygia guttata ENSTGUG00000010892 I
olig2 Takifugu rubripes ENSTRUG00000014944 I
olig2 Tetraodon nigroviridis ENSTNIG00000000234 I
olig2 Tetraodon nigroviridis ENSTNIG00000003641 I
OLIG3 Tetraodon nigroviridis ENSTNIG00000017004 I
OLIG3 Tupaia belangeri ENSTBEG00000014468 I
olig3 Xenopus tropicalis XB-GENE-919789 I
XP_002938491 Xenopus tropicalis XP_002938491 I
ENSXMAG00000001116 Xiphophorus maculatus ENSXMAG00000001116 I
ENSXMAG00000018245 Xiphophorus maculatus ENSXMAG00000018245 I