nhr-3 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003602 T306127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00		 Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00687_2.00 Nuclear receptor 51 120

DNA Binding Domains

Protein ID Domain From To Sequence
H01A20.1 Nuclear receptor 51 120

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.882
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.992
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.891
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.993
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.893
ACOC_0000732601 Angiostrongylus costaricensis ACOC_0000732601 I 0.971
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.755
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.989
ASU_10946 Ascaris suum ASU_10946 I 0.992
Bm12053 Brugia malayi Bm12053 I 0.882
Bm14724 Brugia malayi Bm14724 I 0.992
Bm4894 Brugia malayi Bm4894 I 0.882
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.992
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.882
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.783
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.985
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.829
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.824
CBN07936 Caenorhabditis brenneri CBN07936 I 0.880
CBN19233 Caenorhabditis brenneri CBN19233 I 0.993
CBN20828 Caenorhabditis brenneri CBN20828 I 0.880
CBG07552 Caenorhabditis briggsae CBG07552 I 0.993
CBG19604 Caenorhabditis briggsae CBG19604 I 0.882
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.880
CJA04720 Caenorhabditis japonica CJA04720 I 0.882
CJA13646 Caenorhabditis japonica CJA13646 I 0.992
CRE06667 Caenorhabditis remanei CRE06667 I 0.880
CRE15289 Caenorhabditis remanei CRE15289 I 0.993
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.987
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.882
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.992
DME_0000480501 Dracunculus medinensis DME_0000480501 I 0.892
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.882
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.824
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.984
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.882
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.754
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.891
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.993
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.891
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.992
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.882
LOAG_05485 Loa loa LOAG_05485 I 0.882
LOAG_18352 Loa loa LOAG_18352 I 0.992
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.985
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.985
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.885
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.985
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.824
Minc01725 Meloidogyne incognita Minc01725 I 0.985
Minc13525 Meloidogyne incognita Minc13525 I 0.985
Minc15420 Meloidogyne incognita Minc15420 I 0.885
NECAME_04545 Necator americanus NECAME_04545 I 0.993
NECAME_05125 Necator americanus NECAME_05125 I 0.891
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.891
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.993
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.891
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.992
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.882
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.882
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.992
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.992
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.882
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.761
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.752
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.854
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.891
scaffold180-EXSNAP2012.20 Pristionchus exspectatus scaffold180-EXSNAP2012.20 I 0.745
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.875
PPA02306 Pristionchus pacificus PPA02306 I 0.745
PPA20304 Pristionchus pacificus PPA20304 I 0.987
PPA21285 Pristionchus pacificus PPA21285 I 0.875
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.832
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.765
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.991
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.893
L596_g27130 Steinernema carpocapsae L596_g27130 I 0.788
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.808
L889_g29204 Steinernema feltiae L889_g29204 I 0.891
L889_g29246 Steinernema feltiae L889_g29246 I 0.776
L889_g5777 Steinernema feltiae L889_g5777 I 0.849
L889_g6303 Steinernema feltiae L889_g6303 I 0.808
L889_g8361 Steinernema feltiae L889_g8361 I 0.766
L893_g27196 Steinernema glaseri L893_g27196 I 0.808
L893_g29388 Steinernema glaseri L893_g29388 I 0.832
L893_g29555 Steinernema glaseri L893_g29555 I 0.992
L893_g6878 Steinernema glaseri L893_g6878 I 0.891
L898_g10316 Steinernema monticolum L898_g10316 I 0.765
L898_g14928 Steinernema monticolum L898_g14928 I 0.762
L898_g23965 Steinernema monticolum L898_g23965 I 0.808
L898_g24498 Steinernema monticolum L898_g24498 I 0.832
L898_g4801 Steinernema monticolum L898_g4801 I 0.891
L892_g19201 Steinernema scapterisci L892_g19201 I 0.805
L892_g21738 Steinernema scapterisci L892_g21738 I 0.796
L892_g650 Steinernema scapterisci L892_g650 I 0.991
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.828
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.891
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.854
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.891
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.854
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.828
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.828
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.854
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.891
SVUK_0001012101 Strongylus vulgaris SVUK_0001012101 I 0.931
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.992
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.783
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.993
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.992
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.882
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.992
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.992
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.882