YQE_11038 (Dendroctonus ponderosae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 YQE_11038 T306439_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tll
M02408_2.00 		Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN		 PBM
Weirauch et al.(2014)
pTH5714 		0.965 0.757
tll
M03932_2.00 		Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN		 SELEX
Nitta et al.(2015)
tll_1 		0.965 0.757
tll
M03933_2.00 		Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN		 SELEX
Nitta et al.(2015)
tll_2 		0.965 0.757
tll
M06558_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Mathelier et al.(2014)
MA0459.1 		0.965 0.757
tll
M06424_2.00 		Drosophila melanogaster
AAAGTYA
TRACTTT		 B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720 		0.965 0.757
tll
M06425_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720 		0.965 0.757
tll
M09688_2.00 		Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK		 Misc
Kulakovskiy et al.(2009)
tll 		0.965 0.757
tll
M11190_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TLL_Q6 		0.965 0.757
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.896 0.729
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.896 0.729
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.896 0.729
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.896 0.729
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.896 0.729
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.896 0.729
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.896 0.729
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.896 0.729
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.896 0.729
dsf
M06431_2.00 		Drosophila melanogaster
AAAAGTCANH
DNTGACTTTT		 B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381 		0.830 0.700
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN72295 Nuclear receptor 11 82

Links

Other Nuclear receptor family TFs
Other Dendroctonus ponderosae TFs

255 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01027 Acanthocheilonema viteae nAv.1.0.1.g01027 I 0.950
ACYPI009360 Acyrthosiphon pisum ACYPI009360 I 0.948
ACYPI56792 Acyrthosiphon pisum ACYPI56792 I 0.841
AAEL003020 Aedes aegypti AAEL003020 I 0.966
AAEL005381 Aedes aegypti AAEL005381 I 0.838
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.896
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.896
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.896
ANCCAN_24590 Ancylostoma caninum ANCCAN_24590 I 0.953
ACAC_0001268701 Angiostrongylus cantonensis ACAC_0001268701 I 0.953
ACOC_0000908001 Angiostrongylus costaricensis ACOC_0000908001 I 0.953
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.896
AALB000508 Anopheles albimanus AALB000508 I 0.838
AALB003284 Anopheles albimanus AALB003284 I 0.966
AARA002508 Anopheles arabiensis AARA002508 I 0.966
AARA011806 Anopheles arabiensis AARA011806 I 0.838
AATE006814 Anopheles atroparvus AATE006814 I 0.966
AATE017601 Anopheles atroparvus AATE017601 I 0.838
ACHR006241 Anopheles christyi ACHR006241 I 0.838
ACOM032542 Anopheles coluzzii ACOM032542 I 0.838
ACOM036097 Anopheles coluzzii ACOM036097 I 0.966
ACUA015273 Anopheles culicifacies ACUA015273 I 0.966
ADAC006907 Anopheles darlingi ADAC006907 I 0.966
ADIR001527 Anopheles dirus ADIR001527 I 0.964
ADIR011495 Anopheles dirus ADIR011495 I 0.838
AEPI011017 Anopheles epiroticus AEPI011017 I 0.966
AFAF007327 Anopheles farauti AFAF007327 I 0.838
AFAF018214 Anopheles farauti AFAF018214 I 0.966
AFUN007550 Anopheles funestus AFUN007550 I 0.966
AFUN008855 Anopheles funestus AFUN008855 I 0.838
AGAP000819 Anopheles gambiae AGAP000819 I 0.966
AGAP009575 Anopheles gambiae AGAP009575 I 0.838
AMAM000431 Anopheles maculatus AMAM000431 I 0.966
AMEC009570 Anopheles melas AMEC009570 I 0.838
AMEC019536 Anopheles melas AMEC019536 I 0.966
AMEM005434 Anopheles merus AMEM005434 I 0.966
AMIN005547 Anopheles minimus AMIN005547 I 0.966
AQUA002816 Anopheles quadriannulatus AQUA002816 I 0.966
AQUA007553 Anopheles quadriannulatus AQUA007553 I 0.838
ASIS014807 Anopheles sinensis ASIS014807 I 0.966
ASTEI01071 Anopheles stephensi ASTEI01071 I 0.966
ASTEI03772 Anopheles stephensi ASTEI03772 I 0.838
GB50436 Apis mellifera GB50436 I 0.957
GB50458 Apis mellifera GB50458 I 0.818
ALUE_0000403201 Ascaris lumbricoides ALUE_0000403201 I 0.950
ASU_07782 Ascaris suum ASU_07782 I 0.950
ACEP27077 Atta cephalotes ACEP27077 I 0.844
BGLB000662 Biomphalaria glabrata BGLB000662 I 0.825
BGIBMGA002000 Bombyx mori BGIBMGA002000 I 0.961
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.896
NR2E1 Bos taurus ENSBTAG00000013991 I 0.896
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I 0.891
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I 0.891
Bm12516 Brugia malayi Bm12516 I 0.950
Bm2078 Brugia malayi Bm2078 I 0.950
BTMF_0000437701 Brugia timori BTMF_0000437701 I 0.950
BXY_0039800 Bursaphelenchus xylophilus BXY_0039800 I 0.961
CBN02507 Caenorhabditis brenneri CBN02507 I 0.956
CBN17159 Caenorhabditis brenneri CBN17159 I 0.956
CBG06024 Caenorhabditis briggsae CBG06024 I 0.956
nhr-67 Caenorhabditis elegans WBGene00003657 I 0.958
CRE12569 Caenorhabditis remanei CRE12569 I 0.956
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.896
Aan_R007044 Calypte anna Aan_R007044 I 0.896
Cflo_04264--XP_624265.2_APIME Camponotus floridanus Cflo_04264--XP_624265.2_APIME I 0.844
Cflo_06716--XP_001121187.1_APIME Camponotus floridanus Cflo_06716--XP_001121187.1_APIME I 0.957
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.896
CapteG224811 Capitella teleta CapteG224811 I 0.810
CapteG226190 Capitella teleta CapteG226190 I 0.965
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.896
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.896
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.896
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.896
CLEC004804 Cimex lectularius CLEC004804 I 0.952
CLEC025112 Cimex lectularius CLEC025112 I 0.836
csin111366 Clonorchis sinensis csin111366 I 0.958
CGI_10028920 Crassostrea gigas CGI_10028920 I 0.969
CGI_10028921 Crassostrea gigas CGI_10028921 I 0.964
CpipJ_CPIJ012467 Culex pipiens CpipJ_CPIJ012467 I 0.966
CPIJ012467 Culex quinquefasciatus CPIJ012467 I 0.966
KGM_01261 Danaus plexippus KGM_01261 I 0.833
KGM_12726 Danaus plexippus KGM_12726 I 0.833
KGM_21528 Danaus plexippus KGM_21528 I 0.962
nr2e1 Danio rerio ENSDARG00000017107 I 0.894
DAPPUDRAFT_106791 Daphnia pulex DAPPUDRAFT_106791 I 0.749
DAPPUDRAFT_299736 Daphnia pulex DAPPUDRAFT_299736 I 0.838
DAPPUDRAFT_299738 Daphnia pulex DAPPUDRAFT_299738 I 0.960
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.896
YQE_10677 Dendroctonus ponderosae YQE_10677 I 0.838
nDi.2.2.2.g02808 Dirofilaria immitis nDi.2.2.2.g02808 I 0.950
DME_0000202701 Dracunculus medinensis DME_0000202701 I 0.948
GF15588 Drosophila ananassae FBgn0092613 I 0.830
GF22927 Drosophila ananassae FBgn0099921 I 0.965
GG11781 Drosophila erecta FBgn0104076 I 0.965
GG25103 Drosophila erecta FBgn0117232 I 0.830
GH11011 Drosophila grimshawi FBgn0118492 I 0.830
GH14219 Drosophila grimshawi FBgn0121695 I 0.965
tll Drosophila melanogaster FBgn0003720 D 0.965
dsf Drosophila melanogaster FBgn0015381 D 0.830
GI17531 Drosophila mojavensis FBgn0140275 I 0.830
GI22125 Drosophila mojavensis FBgn0144854 I 0.965
GL13521 Drosophila persimilis FBgn0151126 I 0.965
GL19043 Drosophila persimilis FBgn0156644 I 0.830
GA12521 Drosophila pseudoobscura FBgn0072567 I 0.965
GA21482 Drosophila pseudoobscura FBgn0081468 I 0.830
GM18579 Drosophila sechellia FBgn0173485 I 0.830
GD21550 Drosophila simulans FBgn0192976 I 0.965
GD23369 Drosophila simulans FBgn0194755 I 0.830
tll Drosophila virilis FBgn0013145 I 0.965
GJ15408 Drosophila virilis FBgn0202602 I 0.830
GK14159 Drosophila willistoni FBgn0216165 I 0.965
GK14705 Drosophila willistoni FBgn0216711 I 0.830
GE10907 Drosophila yakuba FBgn0228739 I 0.965
GE25723 Drosophila yakuba FBgn0242781 I 0.830
ECANG7_04037 Echinococcus canadensis ECANG7_04037 I 0.934
EEL_0000988401 Elaeophora elaphi EEL_0000988401 I 0.950
EVEC_0000945501 Enterobius vermicularis EVEC_0000945501 I 0.954
NR2E1 Equus caballus ENSECAG00000018990 I 0.896
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.896
NR2E1 Felis catus ENSFCAG00000002255 I 0.896
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.896
ENSGMOG00000008342 Gadus morhua ENSGMOG00000008342 I 0.768
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I 0.896
NR2E1 Gallus gallus ENSGALG00000015305 I 0.896
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I 0.896
Gfo_R016106 Geospiza fortis Gfo_R016106 I 0.876
GPLIN_000079400 Globodera pallida GPLIN_000079400 I 0.960
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.896
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.896
HCOI00499200 Haemonchus contortus HCOI00499200 I 0.953
HCOI00563400 Haemonchus contortus HCOI00563400 I 0.953
HPLM_0000273901 Haemonchus placei HPLM_0000273901 I 0.953
HHAL003045-PA Halyomorpha halys HHAL003045-PA I 0.841
HHAL007294-PA Halyomorpha halys HHAL007294-PA I 0.963
Hsal_06558--XP_001121187.1_APIME Harpegnathos saltator Hsal_06558--XP_001121187.1_APIME I 0.957
Hsal_12124--XP_624265.2_APIME Harpegnathos saltator Hsal_12124--XP_624265.2_APIME I 0.844
HMEL012854 Heliconius melpomene HMEL012854 I 0.961
HPBE_0001512201 Heligmosomoides bakeri HPBE_0001512201 I 0.841
HelroG194580 Helobdella robusta HelroG194580 I 0.904
HelroG71774 Helobdella robusta HelroG71774 I 0.957
HelroG81672 Helobdella robusta HelroG81672 I 0.845
NR2E1 Homo sapiens ENSG00000112333 D 0.896
TTAC_0000853401 Hydatigera taeniaeformis TTAC_0000853401 I 0.963
HDID_0000867201 Hymenolepis diminuta HDID_0000867201 I 0.963
HmN_000489600 Hymenolepis microstoma HmN_000489600 I 0.963
HNAJ_0000904901 Hymenolepis nana HNAJ_0000904901 I 0.963
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.896
ISCW010891 Ixodes scapularis ISCW010891 I 0.963
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I 0.896
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.896
LDEC003555 Leptinotarsa decemlineata LDEC003555 I 0.838
LDEC005682 Leptinotarsa decemlineata LDEC005682 I 0.949
LotgiG130367 Lottia gigantea LotgiG130367 I 0.968
LotgiG135497 Lottia gigantea LotgiG135497 I 0.804
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.896
LCUP000197 Lucilia cuprina LCUP000197 I 0.965
LCUP005636 Lucilia cuprina LCUP005636 I 0.830
LLOJ000605 Lutzomyia longipalpis LLOJ000605 I 0.964
LLOJ008560 Lutzomyia longipalpis LLOJ008560 I 0.830
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.896
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.896
ENSMEUG00000016597 Macropus eugenii ENSMEUG00000016597 I 0.745
MESCA004444 Megaselia scalaris MESCA004444 I 0.835
MCINX005281 Melitaea cinxia MCINX005281 I 0.833
genemark-nMf.1.1.scaf00299-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00299-processed-gene-0.6 I 0.958
Minc11620 Meloidogyne incognita Minc11620 I 0.958
Minc12749 Meloidogyne incognita Minc12749 I 0.958
Minc12751 Meloidogyne incognita Minc12751 I 0.958
NR2E3 Monodelphis domestica ENSMODG00000001949 I 0.745
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.896
MDOA000688 Musca domestica MDOA000688 I 0.965
MDOA002279 Musca domestica MDOA002279 I 0.835
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.896
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.896
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.896
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I 0.857
NBR_0002150401 Nippostrongylus brasiliensis NBR_0002150401 I 0.953
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.896
OFLC_0001242901 Onchocerca flexuosa OFLC_0001242901 I 0.950
nOo.2.0.1.g00175 Onchocerca ochengi nOo.2.0.1.g00175 I 0.950
WBGene00241769 Onchocerca volvulus WBGene00241769 I 0.950
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.896
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I 0.896
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.896
nr2e3 Oryzias latipes ENSORLG00000007175 I 0.746
nr2e1 Oryzias latipes ENSORLG00000013426 I 0.896
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.896
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.896
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.896
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.896
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.896
PTRK_0000518200 Parastrongyloides trichosuri PTRK_0000518200 I 0.955
PHUM331460 Pediculus humanus PHUM331460 I 0.960
PHUM596250 Pediculus humanus PHUM596250 I 0.841
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.896
PPAI002209 Phlebotomus papatasi PPAI002209 I 0.903
PPAI008488 Phlebotomus papatasi PPAI008488 I 0.830
ENSPFOG00000006516 Poecilia formosa ENSPFOG00000006516 I 0.746
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I 0.896
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.896
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.896
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.896
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.896
RSKR_0000792200 Rhabditophanes kr3021 RSKR_0000792200 I 0.948
RPRC007025 Rhodnius prolixus RPRC007025 I 0.962
nRc.2.0.1.g16033 Romanomermis culicivorax nRc.2.0.1.g16033 I 0.945
Sakowv30026672m.g Saccoglossus kowalevskii Sakowv30026672m.g I 0.885
Sakowv30031927m.g Saccoglossus kowalevskii Sakowv30031927m.g I 0.836
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.896
SSLN_0001329801 Schistocephalus solidus SSLN_0001329801 I 0.950
Sjc_0106400 Schistosoma japonicum Sjc_0106400 I 0.785
Smp_155250 Schistosoma mansoni Smp_155250 I 0.967
SMU15014023 Schmidtea mediterranea SMU15014023 I 0.964
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.903
SMU15026844 Schmidtea mediterranea SMU15026844 I 0.964
SMU15032661 Schmidtea mediterranea SMU15032661 I 0.964
NR2E1 Sorex araneus ENSSARG00000013555 I 0.896
L596_g15766 Steinernema carpocapsae L596_g15766 I 0.956
L889_g31911 Steinernema feltiae L889_g31911 I 0.956
L893_g4326 Steinernema glaseri L893_g4326 I 0.956
L898_g6157 Steinernema monticolum L898_g6157 I 0.956
L892_g15278 Steinernema scapterisci L892_g15278 I 0.956
SMAR006008 Strigamia maritima SMAR006008 I 0.966
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I 0.868
SPU_024486 Strongylocentrotus purpuratus SPU_024486 I 0.836
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I 0.868
SPAL_0001263800 Strongyloides papillosus SPAL_0001263800 I 0.956
SSTP_0000630700 Strongyloides stercoralis SSTP_0000630700 I 0.957
SVE_0117200 Strongyloides venezuelensis SVE_0117200 I 0.956
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.896
TASK_0000491201 Taenia asiatica TASK_0000491201 I 0.934
TsM_000278500 Taenia solium TsM_000278500 I 0.934
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.896
nr2e1 Takifugu rubripes ENSTRUG00000001893 I 0.896
TELCIR_04430 Teladorsagia circumcincta TELCIR_04430 I 0.953
tetur01g02690 Tetranychus urticae tetur01g02690 I 0.816
tetur08g01210 Tetranychus urticae tetur08g01210 I 0.964
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I 0.896
TCLT_0000820901 Thelazia callipaeda TCLT_0000820901 I 0.952
TCNE_0000809801 Toxocara canis TCNE_0000809801 I 0.950
TC000441 Tribolium castaneum TC000441 I 0.954
TC001069 Tribolium castaneum TC001069 I 0.838
D917_09121 Trichinella nativa D917_09121 I 0.962
EFV59616 Trichinella spiralis EFV59616 I 0.962
TRE_0001185401 Trichobilharzia regenti TRE_0001185401 I 0.967
TMUE_s0114001400 Trichuris muris TMUE_s0114001400 I 0.955
D918_06154 Trichuris suis D918_06154 I 0.956
TTRE_0000057901 Trichuris trichiura TTRE_0000057901 I 0.956
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.896
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.896
WUBG_10076 Wuchereria bancrofti WUBG_10076 I 0.950
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.898
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.898
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I 0.896
ENSXMAG00000015842 Xiphophorus maculatus ENSXMAG00000015842 I 0.746