CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc04767
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc04767
T307365_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc04767
Nuclear receptor
7
86
TQCKVCGAKEHVCFHFGVSTCRACGAFFRRYINNGEVCKFECKCLQKPLSKENKDGTSQTNLAKCKKCRLDKCLLVGMKR
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00052p00202630
Amborella trichopoda
AMTR_s00052p00202630
I
Aquca_027_00077
Aquilegia coerulea
Aquca_027_00077
I
scaffold_402348.1
Arabidopsis lyrata
scaffold_402348.1
I
fgenesh2_kg.3__997__AT3G09735.1
Arabidopsis lyrata
fgenesh2_kg.3__997__AT3G09735.1
I
fgenesh1_pm.C_scaffold_5001425
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001425
I
S1FA3
Arabidopsis thaliana
AT3G09735
D
S1FA1
Arabidopsis thaliana
AT3G53370
I
Bostr.22252s0094
Boechera stricta
Bostr.22252s0094
I
Bostr.23794s0377
Boechera stricta
Bostr.23794s0377
I
Bo5g138130
Brassica oleracea
Bo5g138130
I
Bo3g061880
Brassica oleracea
Bo3g061880
I
Bo1g144300
Brassica oleracea
Bo1g144300
I
Bra034084
Brassica rapa
Bra034084
I
Bra029784
Brassica rapa
Bra029784
I
Cagra.0666s0032
Capsella grandiflora
Cagra.0666s0032
I
Cagra.2515s0064
Capsella grandiflora
Cagra.2515s0064
I
Carubv10015035m.g
Capsella rubella
Carubv10015035m.g
I
Carubv10025429m.g
Capsella rubella
Carubv10025429m.g
I
evm.TU.supercontig_638.2
Carica papaya
evm.TU.supercontig_638.2
I
Ca_12028
Cicer arietinum
Ca_12028
I
Ca_12027
Cicer arietinum
Ca_12027
I
Cla018556
Citrullus lanatus
Cla018556
I
Cla018106
Citrullus lanatus
Cla018106
I
Ciclev10013218m.g
Citrus clementina
Ciclev10013218m.g
I
orange1.1g044991m.g
Citrus sinensis
orange1.1g044991m.g
I
Cucsa.307040
Cucumis sativus
Cucsa.307040
I
Cucsa.124240
Cucumis sativus
Cucsa.124240
I
Eucgr.A01168
Eucalyptus grandis
Eucgr.A01168
I
Thhalv10021874m.g
Eutrema salsugineum
Thhalv10021874m.g
I
Thhalv10017496m.g
Eutrema salsugineum
Thhalv10017496m.g
I
gene09647-v1.0-hybrid
Fragaria vesca
gene09647-v1.0-hybrid
N
GLYMA03G33640
Glycine max
GLYMA03G33640
I
GLYMA19G36350
Glycine max
GLYMA19G36350
I
GLYMA13G20160
Glycine max
GLYMA13G20160
I
GLYMA10G05790
Glycine max
GLYMA10G05790
I
Gorai.002G249300
Gossypium raimondii
Gorai.002G249300
I
Gorai.006G168100
Gossypium raimondii
Gorai.006G168100
I
Gorai.009G419300
Gossypium raimondii
Gorai.009G419300
I
Lus10015073.g
Linum usitatissimum
Lus10015073.g
I
Lus10023177.g
Linum usitatissimum
Lus10023177.g
I
chr1.CM0033.550.nc
Lotus japonicus
chr1.CM0033.550.nc
I
MDP0000276000
Malus domestica
MDP0000276000
N
cassava45931.m1
Manihot esculenta
cassava45931.m1
I
MTR_7g100890
Medicago truncatula
MTR_7g100890
I
MTR_7g100880
Medicago truncatula
MTR_7g100880
I
MTR_7g100905
Medicago truncatula
MTR_7g100905
I
mgf004062m
Mimulus guttatus
mgf004062m
I
mgf000337m
Mimulus guttatus
mgf000337m
I
GSMUA_Achr6G23400_001
Musa acuminata
GSMUA_Achr6G23400_001
N
GSMUA_Achr10G13120_001
Musa acuminata
GSMUA_Achr10G13120_001
I
POPTR_0016s08890
Populus trichocarpa
POPTR_0016s08890
I
POPTR_0006s13230
Populus trichocarpa
POPTR_0006s13230
I
Pm002519
Prunus mume
Pm002519
N
PRUPE_ppa014157mg
Prunus persica
PRUPE_ppa014157mg
N
29805.m001471
Ricinus communis
29805.m001471
I
SapurV1A.0112s0080
Salix purpurea
SapurV1A.0112s0080
I
SapurV1A.0209s0130
Salix purpurea
SapurV1A.0209s0130
I
Solyc09g007500.2
Solanum lycopersicum
Solyc09g007500.2
I
PGSC0003DMG400001772
Solanum tuberosum
PGSC0003DMG400001772
I
PGSC0003DMG400020934
Solanum tuberosum
PGSC0003DMG400020934
I
PGSC0003DMG401017590
Solanum tuberosum
PGSC0003DMG401017590
I
TCM_022113
Theobroma cacao
TCM_022113
I
VIT_08s0040g02220
Vitis vinifera
VIT_08s0040g02220
I
VIT_06s0004g03160
Vitis vinifera
VIT_06s0004g03160
I