CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc05949
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc05949
T307376_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc05949
Nuclear receptor
7
82
KQCKVCGAKENVYYHFGVCTCRACGAFFRRYLENENKQKFTKCKCSTKNKDEKAQPDLTKCKKCRLEKCLSAGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf04083-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04083-augustus-gene-0.6
N
0.912
maker-nMf.1.1.scaf08489-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08489-snap-gene-0.4
N
0.817
maker-nMf.1.1.scaf11243-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf11243-snap-gene-0.6
N
0.748
Minc03112
Meloidogyne incognita
Minc03112
N
0.864
Minc03116
Meloidogyne incognita
Minc03116
N
0.771
Minc03121
Meloidogyne incognita
Minc03121
N
0.990
Minc03124
Meloidogyne incognita
Minc03124
N
0.875
Minc03125
Meloidogyne incognita
Minc03125
N
0.759
Minc04767
Meloidogyne incognita
Minc04767
N
0.761
Minc05955
Meloidogyne incognita
Minc05955
N
0.822
Minc06648
Meloidogyne incognita
Minc06648
N
0.786
Minc06656
Meloidogyne incognita
Minc06656
N
0.799
Minc11359
Meloidogyne incognita
Minc11359
N
0.770
Minc18240
Meloidogyne incognita
Minc18240
N
0.777