augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 T308190_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-46
M00692_2.00 		Caenorhabditis elegans
NNNDWNHRN
NYDNWHNNN		 PBM
Narasimhan et al.(2015)
pTH9924 		0.755 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1-mRNA-1 Nuclear receptor 41 111

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0000041701 Anisakis simplex ASIM_0000041701 N 0.983
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.988
CBN08077 Caenorhabditis brenneri CBN08077 I 0.779
CBN08571 Caenorhabditis brenneri CBN08571 I 0.840
CBN10811 Caenorhabditis brenneri CBN10811 I 0.840
CBN16259 Caenorhabditis brenneri CBN16259 I 0.779
CBG19870 Caenorhabditis briggsae CBG19870 I 0.779
CBG15006 Caenorhabditis briggsae CBG15006 I 0.844
nhr-46 Caenorhabditis elegans WBGene00003636 D 0.755
nhr-97 Caenorhabditis elegans WBGene00003687 N 0.842
CJA19491 Caenorhabditis japonica CJA19491 I 0.749
CJA03362 Caenorhabditis japonica CJA03362 N 0.803
CRE09911 Caenorhabditis remanei CRE09911 I 0.844
CRE14116 Caenorhabditis remanei CRE14116 I 0.844
CRE28659 Caenorhabditis remanei CRE28659 I 0.749
CRE30546 Caenorhabditis remanei CRE30546 I 0.749
GPLIN_000686000 Globodera pallida GPLIN_000686000 N 0.992
HCOI00878400 Haemonchus contortus HCOI00878400 N 0.842
HCOI02063000 Haemonchus contortus HCOI02063000 N 0.842
HCOI02063200 Haemonchus contortus HCOI02063200 N 0.842
HCOI02063400 Haemonchus contortus HCOI02063400 N 0.842
HCOI02063800 Haemonchus contortus HCOI02063800 N 0.842
HCOI02064100 Haemonchus contortus HCOI02064100 N 0.842
Minc11986 Meloidogyne incognita Minc11986 I 0.998
PTRK_0000785300 Parastrongyloides trichosuri PTRK_0000785300 I 0.894
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.757
PPA21285 Pristionchus pacificus PPA21285 I 0.757
L596_g25326 Steinernema carpocapsae L596_g25326 N 0.971
L889_g23169 Steinernema feltiae L889_g23169 N 0.971
L893_g2097 Steinernema glaseri L893_g2097 N 0.971
L898_g11980 Steinernema monticolum L898_g11980 N 0.971
L892_g27553 Steinernema scapterisci L892_g27553 N 0.971
SPAL_0001690000 Strongyloides papillosus SPAL_0001690000 I 0.883
SSTP_0000433200 Strongyloides stercoralis SSTP_0000433200 I 0.896
SVE_0662100 Strongyloides venezuelensis SVE_0662100 I 0.883
SMUV_0001018601 Syphacia muris SMUV_0001018601 N 0.792
TCNE_0000088101 Toxocara canis TCNE_0000088101 N 0.980