CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
T308215_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1-mRNA-1
Nuclear receptor
7
88
KKCKVCGTKDNVCFHYGVCTCRACGAFFRRYLENEKKSKYSKCKCLPNQLLLEESKEEKSGTHWDKCKKCRLDKCFSVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KNAG_0A02550
Kazachstania naganishii
KNAG_0A02550
I
KLTH0F07854g
Kluyveromyces thermotolerans
KLTH0F07854g
I
Kwal_3122
Kluyveromyces waltii
Kwal_3122
I
SAKL0H13024g
Lachancea kluyveri
SAKL0H13024g
I
LALA0_S12e02300g
Lachancea lanzarotensis
LALA0_S12e02300g
N
KLTH0F07854g
Lachancea thermotolerans
KLTH0F07854g
I
NCAS_0C02730
Naumovozyma castellii
NCAS_0C02730
I
NDAI_0C04840
Naumovozyma dairenensis
NDAI_0C04840
I
Scas_Contig679.26
Saccharomyces castellii
Scas_Contig679.26
I
TDEL_0F05470
Torulaspora delbrueckii
TDEL_0F05470
N
BN7_6339
Wickerhamomyces ciferrii
BN7_6339
N
ZBAI_01680
Zygosaccharomyces bailii
ZBAI_01680
N
ZBAI_09613
Zygosaccharomyces bailii
ZBAI_09613
I
ZYRO0A09350g
Zygosaccharomyces rouxii
ZYRO0A09350g
N