CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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genemark-nMf.1.1.scaf00124-processed-gene-0.5
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
genemark-nMf.1.1.scaf00124-processed-gene-0.5
T308641_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
genemark-nMf.1.1.scaf00124-processed-gene-0.5-mRNA-1
Nuclear receptor
7
86
KKCKVCESKVNVCFHYGVCTCRACGAFFRRYIENEGECKYKCKCSQKQLLKENKNGKSQTNLAKCQKCRLQKCLSVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10026910
Crassostrea gigas
CGI_10026910
N
glis2a
Danio rerio
ENSDARG00000078388
N
glis2b
Danio rerio
ENSDARG00000100232
N
ENSGMOG00000014914
Gadus morhua
ENSGMOG00000014914
N
glis2b
Gasterosteus aculeatus
ENSGACG00000011323
N
ENSLOCG00000002612
Lepisosteus oculatus
ENSLOCG00000002612
N
LotgiG97849
Lottia gigantea
LotgiG97849
N
NEMVEDRAFT_v1g95177
Nematostella vectensis
NEMVEDRAFT_v1g95177
N
ENSONIG00000005197
Oreochromis niloticus
ENSONIG00000005197
N
glis2b
Oryzias latipes
ENSORLG00000008275
N
ENSPFOG00000009286
Poecilia formosa
ENSPFOG00000009286
N
ENSPFOG00000011330
Poecilia formosa
ENSPFOG00000011330
N
glis2b
Takifugu rubripes
ENSTRUG00000006205
N
glis2.S
Xenopus laevis
XB-GENE-6251812
N
ENSXMAG00000004642
Xiphophorus maculatus
ENSXMAG00000004642
N
ENSXMAG00000013848
Xiphophorus maculatus
ENSXMAG00000013848
N