CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf11243-snap-gene-0.6
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf11243-snap-gene-0.6
T309588_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf11243-snap-gene-0.6-mRNA-1
Nuclear receptor
7
89
KQCKVCGSKEKVCFHYGVCTCRACGAFFRRYLENENKCRYSECTYKCSQKQLLKENKGKKSETNLANCKKCRLEKCLSVGMKR
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
REPIN1
Bos taurus
ENSBTAG00000038241
N
REPIN1
Callithrix jacchus
ENSCJAG00000010483
N
REPIN1
Canis familiaris
ENSCAFG00000029424
N
ENSCSAG00000006882
Chlorocebus sabaeus
ENSCSAG00000006882
N
REPIN1
Dasypus novemcinctus
ENSDNOG00000032100
N
REPIN1
Felis catus
ENSFCAG00000023343
N
REPIN1
Homo sapiens
ENSG00000214022
N
REPIN1
Loxodonta africana
ENSLAFG00000032387
N
REPIN1
Macaca mulatta
ENSMMUG00000022633
N
Repin1
Mus musculus
ENSMUSG00000052751
N
ENSNLEG00000003811
Nomascus leucogenys
ENSNLEG00000003811
N
REPIN1
Oryctolagus cuniculus
ENSOCUG00000004883
N
REPIN1
Otolemur garnettii
ENSOGAG00000030454
N
REPIN1
Pan troglodytes
ENSPTRG00000033818
N
ENSPANG00000019896
Papio anubis
ENSPANG00000019896
N
ENSPPYG00000018167
Pongo abelii
ENSPPYG00000018167
N
REPIN1
Procavia capensis
ENSPCAG00000011180
N
REPIN1
Pteropus vampyrus
ENSPVAG00000010748
N
Repin1
Rattus norvegicus
ENSRNOG00000008239
N