NBR_0000170601 (Nippostrongylus brasiliensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 NBR_0000170601 T309715_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.891 0.657
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.845 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0000170601-mRNA-1 Nuclear receptor 6 75

Links

Other Nuclear receptor family TFs
Other Nippostrongylus brasiliensis TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_28711 Aegilops tauschii F775_28711 I 0.000
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.000
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.000
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N 0.000
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N 0.000
fgenesh2_kg.8__404__AT5G44080.1 Arabidopsis lyrata fgenesh2_kg.8__404__AT5G44080.1 N 0.000
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N 0.000
AT5G44080 Arabidopsis thaliana AT5G44080 N 0.000
GBF4 Arabidopsis thaliana AT1G03970 N 0.000
Bostr.3148s0051 Boechera stricta Bostr.3148s0051 N 0.000
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N 0.000
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I 0.000
Bo7g067030 Brassica oleracea Bo7g067030 N 0.000
Bo5g004230 Brassica oleracea Bo5g004230 N 0.000
Bra015281 Brassica rapa Bra015281 N 0.000
PK22350.1 Cannabis sativa PK22350.1 N 0.000
PK16522.1 Cannabis sativa PK16522.1 N 0.000
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.000
Cagra.12696s0002 Capsella grandiflora Cagra.12696s0002 N 0.000
Carubv10027647m.g Capsella rubella Carubv10027647m.g N 0.000
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.000
Ca_04375 Cicer arietinum Ca_04375 N 0.000
Cla014026 Citrullus lanatus Cla014026 N 0.000
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I 0.000
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I 0.000
Cucsa.184670 Cucumis sativus Cucsa.184670 I 0.000
Cucsa.363740 Cucumis sativus Cucsa.363740 I 0.000
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I 0.000
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N 0.000
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N 0.000
gene08154-v1.0-hybrid Fragaria vesca gene08154-v1.0-hybrid N 0.000
GLYMA05G25200 Glycine max GLYMA05G25200 I 0.000
GLYMA10G36820 Glycine max GLYMA10G36820 N 0.000
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.000
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N 0.000
MLOC_4554 Hordeum vulgare MLOC_4554 I 0.000
MLOC_64571 Hordeum vulgare MLOC_64571 I 0.000
Lus10028575.g Linum usitatissimum Lus10028575.g N 0.000
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.000
MDP0000208334 Malus domestica MDP0000208334 N 0.000
cassava12750.valid.m1 Manihot esculenta cassava12750.valid.m1 I 0.000
MTR_1g098590 Medicago truncatula MTR_1g098590 N 0.000
mgf008848m Mimulus guttatus mgf008848m N 0.000
mgf015540m Mimulus guttatus mgf015540m I 0.000
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I 0.000
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I 0.000
OBART05G17920 Oryza barthii OBART05G17920 I 0.000
Pavir.J05659 Panicum virgatum Pavir.J05659 I 0.000
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.000
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.000
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I 0.000
Pm022545 Prunus mume Pm022545 I 0.000
Pm004043 Prunus mume Pm004043 I 0.000
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I 0.000
29863.m001047 Ricinus communis 29863.m001047 N 0.000
29955.m001177 Ricinus communis 29955.m001177 I 0.000
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.000
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.000
SapurV1A.5129s0010 Salix purpurea SapurV1A.5129s0010 I 0.000
Si003247m.g Setaria italica Si003247m.g I 0.000
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I 0.000
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.000
TCM_035623 Theobroma cacao TCM_035623 N 0.000
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I 0.000
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I 0.000
TRAES3BF019000220CFD_g Triticum aestivum TRAES3BF019000220CFD_g I 0.000
TRIUR3_24203 Triticum urartu TRIUR3_24203 I 0.000
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N 0.000
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.000
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.000