NBR_0000856001 (Nippostrongylus brasiliensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 NBR_0000856001 T309723_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
daf-12
M00685_2.00 		Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN		 PBM
Narasimhan et al.(2015)
pTH9108 		0.944 0.836
daf-12
M08159_2.00 		Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC		 ChIP-seq
Mathelier et al.(2014)
MA0538.1 		0.944 0.836
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0000856001-mRNA-1 Nuclear receptor 61 127

Links

Other Nuclear receptor family TFs
Other Nippostrongylus brasiliensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_15940 Aegilops tauschii F775_15940 N
F775_28371 Aegilops tauschii F775_28371 N
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N
PK09018.1 Cannabis sativa PK09018.1 N
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N
Cla001429 Citrullus lanatus Cla001429 N
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N
GLYMA02G47640 Glycine max GLYMA02G47640 N
GLYMA14G01020 Glycine max GLYMA14G01020 N
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N
MLOC_65838 Hordeum vulgare MLOC_65838 N
LPERR07G17460 Leersia perrieri LPERR07G17460 N
MDP0000152670 Malus domestica MDP0000152670 N
MDP0000804652 Malus domestica MDP0000804652 N
cassava34106.m1 Manihot esculenta cassava34106.m1 N
cassava34699.m1 Manihot esculenta cassava34699.m1 N
cassava10826.m1 Manihot esculenta cassava10826.m1 N
OBART07G20130 Oryza barthii OBART07G20130 N
OB07G25870 Oryza brachyantha OB07G25870 N
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N
BGIOSGA026022 Oryza indica BGIOSGA026022 N
ONIVA07G18570 Oryza nivara ONIVA07G18570 N
OPUNC07G19030 Oryza punctata OPUNC07G19030 N
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N
CIGR2 Oryza sativa OS07G0583600 N
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N
Pavir.Bb03224 Panicum virgatum Pavir.Bb03224 N
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N
Pm012019 Prunus mume Pm012019 N
Pm015021 Prunus mume Pm015021 N
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N
27613.m000642 Ricinus communis 27613.m000642 N
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N
Si029418m.g Setaria italica Si029418m.g N
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N
Sb02g037650 Sorghum bicolor Sb02g037650 N
TCM_030733 Theobroma cacao TCM_030733 N
TCM_002319 Theobroma cacao TCM_002319 N
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N
Traes_5AL_886E8DACD Triticum aestivum Traes_5AL_886E8DACD N
Traes_5BL_1E751EF1F Triticum aestivum Traes_5BL_1E751EF1F N
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N
SCL5 Vitis vinifera VIT_19s0090g01740 N
GRMZM2G431309 Zea mays GRMZM2G431309 N
GRMZM2G098517 Zea mays GRMZM2G098517 N