PTRK_0000785300 (Parastrongyloides trichosuri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 PTRK_0000785300 T310022_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-36
M02418_2.00 		Caenorhabditis elegans
NNRDMDCRNN
NNYGHKHYNN		 PBM
Weirauch et al.(2014)
pTH6508 		0.772 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0000785300.1 Nuclear receptor 45 115

Links

Other Nuclear receptor family TFs
Other Parastrongyloides trichosuri TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.763
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.763
ANCDUO_22516 Ancylostoma duodenale ANCDUO_22516 N 0.787
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.752
ASIM_0000041701 Anisakis simplex ASIM_0000041701 N 0.950
Bm12053 Brugia malayi Bm12053 I 0.763
Bm4894 Brugia malayi Bm4894 I 0.763
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.763
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.772
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.967
CBN10811 Caenorhabditis brenneri CBN10811 I 0.978
CBN20828 Caenorhabditis brenneri CBN20828 I 0.805
CBN08571 Caenorhabditis brenneri CBN08571 I 0.978
CBN07936 Caenorhabditis brenneri CBN07936 I 0.805
CBG15006 Caenorhabditis briggsae CBG15006 I 0.979
CBG19604 Caenorhabditis briggsae CBG19604 I 0.808
nhr-36 Caenorhabditis elegans WBGene00017198 D 0.772
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.805
nhr-97 Caenorhabditis elegans WBGene00003687 N 0.979
CJA04720 Caenorhabditis japonica CJA04720 I 0.808
CJA03362 Caenorhabditis japonica CJA03362 N 0.972
CRE14116 Caenorhabditis remanei CRE14116 I 0.979
CRE09911 Caenorhabditis remanei CRE09911 I 0.979
CRE06667 Caenorhabditis remanei CRE06667 I 0.805
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.763
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.748
GPLIN_000686000 Globodera pallida GPLIN_000686000 N 0.911
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.763
HCOI02064100 Haemonchus contortus HCOI02064100 N 0.973
HCOI02063800 Haemonchus contortus HCOI02063800 N 0.973
HCOI00878400 Haemonchus contortus HCOI00878400 N 0.973
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.808
HCOI02063000 Haemonchus contortus HCOI02063000 N 0.973
HCOI02063200 Haemonchus contortus HCOI02063200 N 0.973
HCOI02063400 Haemonchus contortus HCOI02063400 N 0.973
HPBE_0002162901 Heligmosomoides bakeri HPBE_0002162901 N 0.784
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.763
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.763
LOAG_05485 Loa loa LOAG_05485 I 0.763
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 I 0.894
Minc11986 Meloidogyne incognita Minc11986 I 0.894
NECAME_05125 Necator americanus NECAME_05125 I 0.763
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.808
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.763
OESDEN_16690 Oesophagostomum dentatum OESDEN_16690 N 0.787
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.763
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.763
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.763
RSKR_0000862400 Rhabditophanes kr3021 RSKR_0000862400 N 0.969
L596_g25326 Steinernema carpocapsae L596_g25326 N 0.932
L889_g23169 Steinernema feltiae L889_g23169 N 0.932
L893_g2097 Steinernema glaseri L893_g2097 N 0.932
L893_g6878 Steinernema glaseri L893_g6878 I 0.750
L898_g11980 Steinernema monticolum L898_g11980 N 0.932
L892_g27553 Steinernema scapterisci L892_g27553 N 0.932
SPAL_0001690000 Strongyloides papillosus SPAL_0001690000 I 0.995
SSTP_0000433200 Strongyloides stercoralis SSTP_0000433200 I 0.995
SVE_0662100 Strongyloides venezuelensis SVE_0662100 I 0.995
SVUK_0000487901 Strongylus vulgaris SVUK_0000487901 N 0.787
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.763
TCNE_0000088101 Toxocara canis TCNE_0000088101 N 0.946
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.763