snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 T310459_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.985 0.776
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2-mRNA-1 Nuclear receptor 1 67

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.849
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.985
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.849
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.985
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.808
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.808
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.845
ACOC_0000732601 Angiostrongylus costaricensis ACOC_0000732601 I 0.947
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.808
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.818
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.981
ASU_10946 Ascaris suum ASU_10946 I 0.985
Bm12053 Brugia malayi Bm12053 I 0.849
Bm14724 Brugia malayi Bm14724 I 0.985
Bm4894 Brugia malayi Bm4894 I 0.849
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.985
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.849
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.988
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.784
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.877
CBN07936 Caenorhabditis brenneri CBN07936 I 0.846
CBN19233 Caenorhabditis brenneri CBN19233 I 0.984
CBN20828 Caenorhabditis brenneri CBN20828 I 0.846
CBN31048 Caenorhabditis brenneri CBN31048 I 0.808
CBG07552 Caenorhabditis briggsae CBG07552 I 0.985
CBG19594 Caenorhabditis briggsae CBG19594 I 0.808
CBG19604 Caenorhabditis briggsae CBG19604 I 0.849
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.985
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.846
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.808
CJA04720 Caenorhabditis japonica CJA04720 I 0.849
CJA13646 Caenorhabditis japonica CJA13646 I 0.984
CRE06661 Caenorhabditis remanei CRE06661 I 0.808
CRE06667 Caenorhabditis remanei CRE06667 I 0.846
CRE15289 Caenorhabditis remanei CRE15289 I 0.985
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.808
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.979
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.849
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.985
DME_0000480501 Dracunculus medinensis DME_0000480501 I 0.850
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.808
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.843
EVEC_0000733201 Enterobius vermicularis EVEC_0000733201 N 0.782
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.877
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.993
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.849
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.808
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.849
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.808
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.985
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.808
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.808
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.849
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.801
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.985
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.849
LOAG_05485 Loa loa LOAG_05485 I 0.849
LOAG_18352 Loa loa LOAG_18352 I 0.985
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.775
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.993
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.844
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.993
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.877
Minc01725 Meloidogyne incognita Minc01725 I 0.993
Minc13525 Meloidogyne incognita Minc13525 I 0.993
Minc15420 Meloidogyne incognita Minc15420 I 0.844
NECAME_04545 Necator americanus NECAME_04545 I 0.985
NECAME_05125 Necator americanus NECAME_05125 I 0.849
NECAME_12696 Necator americanus NECAME_12696 I 0.808
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.849
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.808
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.808
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.985
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.849
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.985
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.849
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.849
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.985
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.985
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.849
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.890
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.864
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.753
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.830
PPA20304 Pristionchus pacificus PPA20304 I 0.985
PPA21285 Pristionchus pacificus PPA21285 I 0.830
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.753
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.775
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.835
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.985
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.862
L596_g27130 Steinernema carpocapsae L596_g27130 I 0.808
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.759
L889_g29204 Steinernema feltiae L889_g29204 I 0.860
L889_g29246 Steinernema feltiae L889_g29246 I 0.796
L889_g5777 Steinernema feltiae L889_g5777 I 0.795
L889_g6303 Steinernema feltiae L889_g6303 I 0.759
L889_g8361 Steinernema feltiae L889_g8361 I 0.835
L893_g27196 Steinernema glaseri L893_g27196 I 0.759
L893_g29388 Steinernema glaseri L893_g29388 I 0.775
L893_g29555 Steinernema glaseri L893_g29555 I 0.985
L893_g6878 Steinernema glaseri L893_g6878 I 0.860
L898_g10316 Steinernema monticolum L898_g10316 I 0.835
L898_g14928 Steinernema monticolum L898_g14928 I 0.784
L898_g23965 Steinernema monticolum L898_g23965 I 0.759
L898_g24498 Steinernema monticolum L898_g24498 I 0.775
L898_g4801 Steinernema monticolum L898_g4801 I 0.860
L892_g19201 Steinernema scapterisci L892_g19201 I 0.824
L892_g21738 Steinernema scapterisci L892_g21738 I 0.746
L892_g650 Steinernema scapterisci L892_g650 I 0.985
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.770
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.864
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.890
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.864
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.890
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.770
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.770
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.890
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.864
SVUK_0001012101 Strongylus vulgaris SVUK_0001012101 I 0.885
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.985
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.985
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.808
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.808
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.985
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.849
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.985
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.985
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.849