CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF004706
(
Anopheles farauti
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
AFAF004706
T312393_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN
NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.721
0.721
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN
NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF004706-PA
Paired box
22
143
GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVATPEVEARIEEMKKMNPGIFSWEIREKLIKVMFDTSENKQGIICEMF
Links
Other
Paired box
family TFs
Other
Anopheles farauti
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG007145.2
Alligator sinensis
Alligator_sinensis_CCG007145.2
I
0.715
Alligator_sinensis_CCG006492.1
Alligator sinensis
Alligator_sinensis_CCG006492.1
I
0.721
Alligator_sinensis_CCG007145.1
Alligator sinensis
Alligator_sinensis_CCG007145.1
I
0.721
AALB001246
Anopheles albimanus
AALB001246
N
0.778
ACUA026425
Anopheles culicifacies
ACUA026425
I
0.890
ADIR009743
Anopheles dirus
ADIR009743
N
0.761
AFUN002668
Anopheles funestus
AFUN002668
I
0.861
AMAM016481
Anopheles maculatus
AMAM016481
I
0.811
AMIN006553
Anopheles minimus
AMIN006553
I
0.890
ASIS007645
Anopheles sinensis
ASIS007645
N
0.700
ACEP15304
Atta cephalotes
ACEP15304
I
0.830
ACEP15310
Atta cephalotes
ACEP15310
I
0.925
PAX3
Callithrix jacchus
ENSCJAG00000012088
I
0.730
Cflo_06473--XP_394848.3_APIME
Camponotus floridanus
Cflo_06473--XP_394848.3_APIME
I
0.803
Cmyd_10010530
Chelonia mydas
Cmyd_10010530
I
0.721
CpipJ_CPIJ009206
Culex pipiens
CpipJ_CPIJ009206
I
0.732
CpipJ_CPIJ006494
Culex pipiens
CpipJ_CPIJ006494
I
0.873
CPIJ009206
Culex quinquefasciatus
CPIJ009206
I
0.732
CPIJ006494
Culex quinquefasciatus
CPIJ006494
I
0.873
YQE_12759
Dendroctonus ponderosae
YQE_12759
N
0.713
Pax7
Dipodomys ordii
ENSDORG00000011854
I
0.721
GL14130
Drosophila persimilis
FBgn0151735
I
0.754
ENSGMOG00000003366
Gadus morhua
ENSGMOG00000003366
I
0.738
PAX7
Homo sapiens
ENSG00000009709
D
0.721
PAX3
Homo sapiens
ENSG00000135903
D
0.730
ISCW003096
Ixodes scapularis
ISCW003096
I
0.754
LCUP011796
Lucilia cuprina
LCUP011796
I
0.795
PAX3
Macaca mulatta
ENSMMUG00000020409
I
0.730
ENSMODG00000025571
Monodelphis domestica
ENSMODG00000025571
I
0.721
OESDEN_18680
Oesophagostomum dentatum
OESDEN_18680
I
0.773
Ogr06456
Ophisaurus gracilis
Ogr06456
I
0.721
ENSORLG00000019389
Oryzias latipes
ENSORLG00000019389
I
0.713
PAX7
Procavia capensis
ENSPCAG00000005303
I
0.721
RPRC008887
Rhodnius prolixus
RPRC008887
I
0.752
SINV15897
Solenopsis invicta
SINV15897
I
0.795
SMAR015380
Strigamia maritima
SMAR015380
I
0.770
SMAR008441
Strigamia maritima
SMAR008441
I
0.768
ENSTRUG00000007849
Takifugu rubripes
ENSTRUG00000007849
I
0.738
ENSTNIG00000005618
Tetraodon nigroviridis
ENSTNIG00000005618
I
0.738