PEQ_0000701201 (Parascaris equorum)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 PEQ_0000701201 T312877_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.800 0.800
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.800 0.800
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.717 0.717
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.717 0.717
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.717 0.717
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.717 0.717
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.717 0.717
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.717 0.717
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.717 0.717
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.717 0.717
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.717 0.717
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.717 0.717
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.717 0.717
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.700 0.700
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.700 0.700
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.700 0.700
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.700 0.700
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.700 0.700
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.700 0.700
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.700 0.700
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.700 0.700
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.700 0.700
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.700 0.700
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.700 0.700
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.700 0.700
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.700 0.700
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.700 0.700
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.700 0.700
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.700 0.700
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.700 0.700
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.700 0.700
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.700 0.700
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0000701201-mRNA-1 Paired box 12 71

Links

Other Paired box family TFs
Other Parascaris equorum TFs

288 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_067850 Acremonium chrysogenum ACRE_067850 I
M437DRAFT_67933 Aureobasidium melanogenum M437DRAFT_67933 I
M438DRAFT_155623 Aureobasidium pullulans M438DRAFT_155623 I
AUEXF2481DRAFT_374368 Aureobasidium subglaciale AUEXF2481DRAFT_374368 I
BBA_09189 Beauveria bassiana BBA_09189 I
BGHDH14_bgh05094 Blumeria graminis BGHDH14_bgh05094 I
Bcin08g00160 Botrytis cinerea Bcin08g00160 I
PVAR5_1180 Byssochlamys spectabilis PVAR5_1180 I
PV04_09032 Capronia semiimmersa PV04_09032 I
CHGG_07364 Chaetomium globosum CHGG_07364 I
A1O5_06915 Cladophialophora psammophila A1O5_06915 N
CPUR_08028 Claviceps purpurea CPUR_08028 I
CFIO01_10198 Colletotrichum fioriniae CFIO01_10198 I
GLRG_01145 Colletotrichum graminicola GLRG_01145 I
CH063_08735 Colletotrichum higginsianum CH063_08735 I
CSUB01_05898 Colletotrichum sublineola CSUB01_05898 I
CCM_09080 Cordyceps militaris CCM_09080 I
estExt_Genewise1Plus.C_13371 Cryphonectria parasitica estExt_Genewise1Plus.C_13371 I
DOTSEDRAFT_68376 Dothistroma septosporum DOTSEDRAFT_68376 I
EV44_g6268 Erysiphe necator EV44_g6268 I
UCREL1_10245 Eutypa lata UCREL1_10245 I
NechaG22260 Fusarium solani NechaG22260 I
GGTG_06006 Gaeumannomyces graminis GGTG_06006 I
CMQ_7699 Grosmannia clavigera CMQ_7699 I
MGG_05343 Magnaporthe oryzae MGG_05343 I
MAPG_04263 Magnaporthe poae MAPG_04263 I
MBM_09456 Marssonina brunnea MBM_09456 I
MAC_05572 Metarhizium acridum MAC_05572 I
MAM_04875 Metarhizium album MAM_04875 I
MANI_011912 Metarhizium anisopliae MANI_011912 I
MBR_05015 Metarhizium brunneum MBR_05015 I
MGU_01655 Metarhizium guizhouense MGU_01655 I
MAJ_06898 Metarhizium majus MAJ_06898 I
X797_001512 Metarhizium robertsii X797_001512 I
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I
estExt_Genewise1.C_12176 Mycosphaerella fijiensis estExt_Genewise1.C_12176 I
estExt_fgenesh1_pg.C_chr_10960 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10960 I
gw1.14.468.1 Nectria haematococca gw1.14.468.1 I
col-26 Neurospora crassa NCU07788 D
estExt_Genewise1Plus.C_140234 Neurospora discreta estExt_Genewise1Plus.C_140234 I
NEUTE1DRAFT_59081 Neurospora tetrasperma NEUTE1DRAFT_59081 I
OIDMADRAFT_45538 Oidiodendron maius OIDMADRAFT_45538 I
OCS_01944 Ophiocordyceps sinensis OCS_01944 I
F503_04220 Ophiostoma piceae uamh F503_04220 I
PFICI_10998 Pestalotiopsis fici PFICI_10998 I
PODANS_2_4060 Podospora anserina PODANS_2_4060 I
MYCFIDRAFT_127068 Pseudocercospora fijiensis MYCFIDRAFT_127068 I
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I
V499_05963 Pseudogymnoascus pannorum V499_05963 I
SAPIO_CDS0393 Scedosporium apiospermum SAPIO_CDS0393 I
SBOR_6099 Sclerotinia borealis SBOR_6099 I
SMAC_08231 Sordaria macrospora SMAC_08231 I
SEPMUDRAFT_146091 Sphaerulina musiva SEPMUDRAFT_146091 I
S40288_10011 Stachybotrys chartarum S40288_10011 N
S40288_01569 Stachybotrys chartarum S40288_01569 I
S40285_00097 Stachybotrys chlorohalonata S40285_00097 I
THITE_2108095 Thielavia terrestris THITE_2108095 I
VHEMI08540 Torrubiella hemipterigena VHEMI08540 I
TRIATDRAFT_11573 Trichoderma atroviride TRIATDRAFT_11573 I
TRIREDRAFT_52368 Trichoderma reesei TRIREDRAFT_52368 I
TRIVIDRAFT_156582 Trichoderma virens TRIVIDRAFT_156582 I
UV8b_5300 Ustilaginoidea virens UV8b_5300 I
VDBG_09402 Verticillium albo atrum VDBG_09402 I
VDBG_09402 Verticillium alfalfae VDBG_09402 I
VDAG_04640 Verticillium dahliae VDAG_04640 I
Mycgr3G107320 Zymoseptoria tritici Mycgr3G107320 I