cassava20325.m1 (Manihot esculenta)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 cassava20325.m1 T315875_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G01818
M07247_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT2G01818_col_a 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava20325.m1 PLATZ 60 137

Links

Other PLATZ family TFs
Other Manihot esculenta TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000045775-D1 Bos grunniens ENSBTAP00000045775-D1 N 0.000
ENSBTAP00000047496-D1 Bos grunniens ENSBTAP00000047496-D1 I 0.000
yakG016733 Bos grunniens yakG016733 N 0.000
ENSBTAG00000033874 Bos taurus ENSBTAG00000033874 N 0.000
ENSBTAG00000034444 Bos taurus ENSBTAG00000034444 N 0.000
ENSBTAG00000036343 Bos taurus ENSBTAG00000036343 I 0.000
ENSBTAG00000047120 Bos taurus ENSBTAG00000047120 I 0.000
ENSOARG00000001582 Ovis aries ENSOARG00000001582 N 0.000
ENSOARG00000002777 Ovis aries ENSOARG00000002777 N 0.000
ENSOARG00000002879 Ovis aries ENSOARG00000002879 I 0.000
ENSOARG00000003931 Ovis aries ENSOARG00000003931 N 0.000
ENSOARG00000009065 Ovis aries ENSOARG00000009065 N 0.000
ENSOARG00000009396 Ovis aries ENSOARG00000009396 N 0.000
ENSSSCG00000012732 Sus scrofa ENSSSCG00000012732 I 0.000