REL (Otolemur garnettii)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSOGAG00000013722 T317362_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REL
M02710_2.00 		Homo sapiens
BGGRNWTTCC
GGAAWNYCCV		 SELEX
Mathelier et al.(2014)
MA0101.1 		0.982 0.982
REL
M09350_2.00 		Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA		 Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B 		0.982 0.982
REL
M11235_2.00 		Homo sapiens
BGGRNWTTCC
GGAAWNYCCV		 Transfac
Matys et al.(2006)
V$CREL_01 		0.982 0.982
REL
M11236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREL_Q6 		0.982 0.982
Rel
M09353_2.00 		Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA		 Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A 		0.929 0.929
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000012291 Rel 10 178

Links

Other Rel family TFs
Other Otolemur garnettii TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__1829__AT5G58900.1 Arabidopsis lyrata fgenesh2_kg.8__1829__AT5G58900.1 I 0.000
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I 0.000
fgenesh1_pg.C_scaffold_6000079 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6000079 N 0.000
AT5G01200 Arabidopsis thaliana AT5G01200 N 0.000
AT5G58900 Arabidopsis thaliana AT5G58900 D 0.000
AT2G38090 Arabidopsis thaliana AT2G38090 D 0.000
Bostr.23794s0264 Boechera stricta Bostr.23794s0264 I 0.000
Bostr.26833s0356 Boechera stricta Bostr.26833s0356 I 0.000
Bostr.6251s0088 Boechera stricta Bostr.6251s0088 I 0.000
Bo9g135730 Brassica oleracea Bo9g135730 I 0.000
Bo4g187390 Brassica oleracea Bo4g187390 I 0.000
Bo4g029810 Brassica oleracea Bo4g029810 I 0.000
Bo3g032160 Brassica oleracea Bo3g032160 I 0.000
Bo3g018460 Brassica oleracea Bo3g018460 I 0.000
Bo2g002350 Brassica oleracea Bo2g002350 I 0.000
Bra000038 Brassica rapa Bra000038 I 0.000
Bra002610 Brassica rapa Bra002610 I 0.000
Bra005139 Brassica rapa Bra005139 I 0.000
Bra006741 Brassica rapa Bra006741 I 0.000
Bra017138 Brassica rapa Bra017138 I 0.000
Bra028892 Brassica rapa Bra028892 I 0.000
PK27213.1 Cannabis sativa PK27213.1 D 0.000
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I 0.000
Cagra.0891s0087 Capsella grandiflora Cagra.0891s0087 I 0.000
Cagra.7888s0001 Capsella grandiflora Cagra.7888s0001 N 0.000
Carubv10001741m.g Capsella rubella Carubv10001741m.g N 0.000
Carubv10023736m.g Capsella rubella Carubv10023736m.g I 0.000
Carubv10026903m.g Capsella rubella Carubv10026903m.g I 0.000
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.000
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I 0.000
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I 0.000
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I 0.000
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I 0.000
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I 0.000
GLYMA07G17660 Glycine max GLYMA07G17660 I 0.000
GLYMA18G42530 Glycine max GLYMA18G42530 I 0.000
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.000
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.000
Lus10035518.g Linum usitatissimum Lus10035518.g I 0.000
Lus10040696.g Linum usitatissimum Lus10040696.g I 0.000
MDP0000142580 Malus domestica MDP0000142580 I 0.000
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.000
Pm002536 Prunus mume Pm002536 I 0.000
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I 0.000
29681.m001296 Ricinus communis 29681.m001296 I 0.000
28288.m000014 Ricinus communis 28288.m000014 I 0.000
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I 0.000
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I 0.000