Pvit_18473 (Pogona vitticeps)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Pvit_18473 T317821_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RELB
M08161_2.00 		Homo sapiens
NNATTCCCCNN
NNGGGGAATNN		 ChIP-seq
Mathelier et al.(2014)
MA1117.1 		0.765 0.765
RELB
M09347_2.00 		Homo sapiens
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C 		0.765 0.765
RELB
M11227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELBP50_Q3 		0.765 0.765
Relb
M09352_2.00 		Mus musculus
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C 		0.759 0.759
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18473 Rel 137 305

Links

Other Rel family TFs
Other Pogona vitticeps TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G41670 Brachypodium distachyon BRADI2G41670 N 0.000
MLOC_70258 Hordeum vulgare MLOC_70258 N 0.000
LPERR01G05820 Leersia perrieri LPERR01G05820 N 0.000
LPERR01G17450 Leersia perrieri LPERR01G17450 N 0.000
OBART01G06120 Oryza barthii OBART01G06120 N 0.000
OBART01G06170 Oryza barthii OBART01G06170 N 0.000
OBART01G20310 Oryza barthii OBART01G20310 N 0.000
OB01G16120 Oryza brachyantha OB01G16120 N 0.000
ORGLA08G0199700 Oryza glaberrima ORGLA08G0199700 N 0.000
ORGLA01G0397100 Oryza glaberrima ORGLA01G0397100 N 0.000
ORGLA01G0058200 Oryza glaberrima ORGLA01G0058200 N 0.000
OGLUM01G23890 Oryza glumaepatula OGLUM01G23890 N 0.000
OGLUM01G06730 Oryza glumaepatula OGLUM01G06730 N 0.000
OGLUM01G06690 Oryza glumaepatula OGLUM01G06690 N 0.000
BGIOSGA002943 Oryza indica BGIOSGA002943 N 0.000
BGIOSGA002940 Oryza indica BGIOSGA002940 N 0.000
BGIOSGA003814 Oryza indica BGIOSGA003814 N 0.000
OLONG_006433 Oryza longistaminata OLONG_006433 N 0.000
OMERI01G18730 Oryza meridionalis OMERI01G18730 N 0.000
OMERI01G06310 Oryza meridionalis OMERI01G06310 N 0.000
ONIVA01G07080 Oryza nivara ONIVA01G07080 N 0.000
ONIVA01G07190 Oryza nivara ONIVA01G07190 N 0.000
ONIVA01G22870 Oryza nivara ONIVA01G22870 N 0.000
OPUNC01G20610 Oryza punctata OPUNC01G20610 N 0.000
ORUFI01G06710 Oryza rufipogon ORUFI01G06710 N 0.000
ORUFI01G22920 Oryza rufipogon ORUFI01G22920 N 0.000
OS01G0575200 Oryza sativa OS01G0575200 N 0.000
OS01G0195801 Oryza sativa OS01G0195801 N 0.000
OS01G0196300 Oryza sativa OS01G0196300 N 0.000
Pavir.Eb01823 Panicum virgatum Pavir.Eb01823 N 0.000
Pavir.Ea01566 Panicum virgatum Pavir.Ea01566 N 0.000
Pavir.Ea00369 Panicum virgatum Pavir.Ea00369 N 0.000
Si001328m.g Setaria italica Si001328m.g N 0.000
Si001494m.g Setaria italica Si001494m.g N 0.000
Sb03g002910 Sorghum bicolor Sb03g002910 N 0.000
Sb03g025860 Sorghum bicolor Sb03g025860 N 0.000
TRAES3BF047700010CFD_g Triticum aestivum TRAES3BF047700010CFD_g N 0.000
GRMZM2G333582 Zea mays GRMZM2G333582 N 0.000
GRMZM2G397755 Zea mays GRMZM2G397755 N 0.000
GRMZM2G463133 Zea mays GRMZM2G463133 N 0.000
GRMZM5G849600 Zea mays GRMZM5G849600 N 0.000