CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TVAG_492040
(
Trichomonas vaginalis
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
TVAG_492040
T318904_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_492040
RFX
56
110
NGYALFWLDCPYEMYEKKALYEEYRKYCHENDIRPSSREKFYAGIKHLFEVRNGK
Links
Other
RFX
family TFs
Other
Trichomonas vaginalis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
N
maker-nMf.1.1.scaf11243-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf11243-snap-gene-0.6
N
maker-nMf.1.1.scaf08516-augustus-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf08516-augustus-gene-0.5
N
maker-nMf.1.1.scaf08489-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08489-snap-gene-0.4
N
maker-nMf.1.1.scaf04083-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04083-augustus-gene-0.6
N
maker-nMf.1.1.scaf03855-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf03855-augustus-gene-0.7
N
genemark-nMf.1.1.scaf00124-processed-gene-0.5
Meloidogyne floridensis
genemark-nMf.1.1.scaf00124-processed-gene-0.5
N
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
N
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0
N
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
N
MhA1_Contig311.frz3.gene3
Meloidogyne hapla
MhA1_Contig311.frz3.gene3
N
Minc05955
Meloidogyne incognita
Minc05955
N
Minc18240
Meloidogyne incognita
Minc18240
N
Minc17472
Meloidogyne incognita
Minc17472
N
Minc11362
Meloidogyne incognita
Minc11362
N
Minc11361
Meloidogyne incognita
Minc11361
N
Minc06656
Meloidogyne incognita
Minc06656
N
Minc06648
Meloidogyne incognita
Minc06648
N
Minc05938
Meloidogyne incognita
Minc05938
N
Minc03112
Meloidogyne incognita
Minc03112
N
Minc03113
Meloidogyne incognita
Minc03113
N
Minc03116
Meloidogyne incognita
Minc03116
N
Minc03121
Meloidogyne incognita
Minc03121
N
Minc03124
Meloidogyne incognita
Minc03124
N
Minc03125
Meloidogyne incognita
Minc03125
N
Minc03951
Meloidogyne incognita
Minc03951
N
Minc04767
Meloidogyne incognita
Minc04767
N
Minc02822
Meloidogyne incognita
Minc02822
N
Minc05939
Meloidogyne incognita
Minc05939
N
Minc05941
Meloidogyne incognita
Minc05941
N
Minc05944
Meloidogyne incognita
Minc05944
N
Minc05946
Meloidogyne incognita
Minc05946
N
Minc05949
Meloidogyne incognita
Minc05949
N
Minc05953
Meloidogyne incognita
Minc05953
N
Minc05954
Meloidogyne incognita
Minc05954
N