RUNX3 (Gorilla gorilla)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSGGOG00000004848 T319392_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		1.000 1.000
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		1.000 1.000
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		1.000 1.000
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		1.000 1.000
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		1.000 1.000
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		1.000 1.000
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		1.000 1.000
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		1.000 1.000
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		1.000 1.000
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		1.000 1.000
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		1.000 1.000
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		1.000 1.000
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.946 0.946
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.946 0.946
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.946 0.946
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.946 0.946
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.946 0.946
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.946 0.946
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.946 0.946
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.946 0.946
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.946 0.946
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.946 0.946
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.946 0.946
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.946 0.946
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.931 0.931
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.931 0.931
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.931 0.931
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.931 0.931
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.931 0.931
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.931 0.931
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.931 0.931
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.931 0.931
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.931 0.931
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.931 0.931
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.931 0.931
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.931 0.931
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.715 0.715
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.715 0.715
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.715 0.715
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000004751 Runt 68 197
ENSGGOP00000022644 Runt 42 171

Links

Other Runt family TFs
Other Gorilla gorilla TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014340 Ailuropoda melanoleuca ENSAMEG00000014340 N
Alligator_sinensis_CCG000560.1 Alligator sinensis Alligator_sinensis_CCG000560.1 N
ENSAPLG00000004997 Anas platyrhynchos ENSAPLG00000004997 N
MXD4 Anolis carolinensis ENSACAG00000007819 N
Afo_R015384 Aptenodytes forsteri Afo_R015384 N
MXD4 Bos taurus ENSBTAG00000015209 N
MXD4 Callithrix jacchus ENSCJAG00000014432 N
Aan_R001830 Calypte anna Aan_R001830 N
MXD4 Canis familiaris ENSCAFG00000014873 N
MXD4 Cavia porcellus ENSCPOG00000022492 N
mxd1 Danio rerio ENSDARG00000032039 N
mxd4 Danio rerio ENSDARG00000054031 N
MXD4 Echinops telfairi ENSETEG00000005547 N
MXD4 Equus caballus ENSECAG00000002580 N
MXD4 Felis catus ENSFCAG00000012927 N
ENSFALG00000009868 Ficedula albicollis ENSFALG00000009868 N
MXD4 Gallus gallus ENSGALG00000015688 N
mxd4 Gasterosteus aculeatus ENSGACG00000017587 N
mxd1 Gasterosteus aculeatus ENSGACG00000013215 I
Gfo_R003202 Geospiza fortis Gfo_R003202 N
MXD4 Gorilla gorilla ENSGGOG00000000747 N
MXD4 Homo sapiens ENSG00000123933 N
ENSSTOG00000028770 Ictidomys tridecemlineatus ENSSTOG00000028770 N
ENSLACG00000006663 Latimeria chalumnae ENSLACG00000006663 N
ENSLOCG00000015320 Lepisosteus oculatus ENSLOCG00000015320 I
ENSLOCG00000002303 Lepisosteus oculatus ENSLOCG00000002303 N
MXD4 Loxodonta africana ENSLAFG00000026709 N
ENSP00000337889 Macaca fascicularis ENSP00000337889 N
ENSMMUG00000001160 Macaca mulatta ENSMMUG00000001160 N
ENSMEUG00000013427 Macropus eugenii ENSMEUG00000013427 N
MXD4 Meleagris gallopavo ENSMGAG00000013027 N
MXD4 Monodelphis domestica ENSMODG00000004033 N
ENSMPUG00000010989 Mustela putorius furo ENSMPUG00000010989 N
Mxd4 Mus musculus ENSMUSG00000037235 N
Ogr18275 Ophisaurus gracilis Ogr18275 N
ENSONIG00000015871 Oreochromis niloticus ENSONIG00000015871 I
ENSONIG00000017548 Oreochromis niloticus ENSONIG00000017548 N
MXD4 Oryctolagus cuniculus ENSOCUG00000005063 N
mxd1 Oryzias latipes ENSORLG00000015461 I
mxd4 Oryzias latipes ENSORLG00000006439 N
MXD4 Otolemur garnettii ENSOGAG00000011305 N
MXD4 Pan troglodytes ENSPTRG00000015844 N
ENSPANG00000024535 Papio anubis ENSPANG00000024535 N
ENSPSIG00000016320 Pelodiscus sinensis ENSPSIG00000016320 N
ENSPFOG00000011915 Poecilia formosa ENSPFOG00000011915 N
ENSPFOG00000004367 Poecilia formosa ENSPFOG00000004367 I
Pvit_14853 Pogona vitticeps Pvit_14853 N
ENSPPYG00000014540 Pongo abelii ENSPPYG00000014540 N
MXD4 Procavia capensis ENSPCAG00000014133 N
MXD4 Pteropus vampyrus ENSPVAG00000011169 N
Mxd4 Rattus norvegicus ENSRNOG00000015033 N
ENSSHAG00000011878 Sarcophilus harrisii ENSSHAG00000011878 N
MXD4 Sus scrofa ENSSSCG00000008687 N
MXD4 Taeniopygia guttata ENSTGUG00000010530 N
mxd4 Takifugu rubripes ENSTRUG00000003046 N
mxd1 Tetraodon nigroviridis ENSTNIG00000000414 I
mxd4 Tetraodon nigroviridis ENSTNIG00000018042 N
MXD4 Tursiops truncatus ENSTTRG00000013740 N
Tal_R007717 Tyto alba Tal_R007717 N
mxd4.S Xenopus laevis XB-GENE-6256011 N
mxd1.L Xenopus laevis XB-GENE-943720 N
mxd4.L Xenopus laevis XB-GENE-6252709 N
mxd4 Xenopus tropicalis XB-GENE-6257573 N
mxd1 Xenopus tropicalis XB-GENE-943715 N
ENSXMAG00000005473 Xiphophorus maculatus ENSXMAG00000005473 N
ENSXMAG00000004566 Xiphophorus maculatus ENSXMAG00000004566 I