CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra75840
(
Phytophthora ramorum
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
Phyra75840
T320694_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra75840
RWP-RK
104
152
VVQLEDLRACFNMPIAAVARKFGICATLLKKICRRHGIQRWPHRQIRSL
Links
Other
RWP-RK
family TFs
Other
Phytophthora ramorum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_12150001
Phytophthora capsici
estExt_fgenesh1_kg.C_12150001
N
0.980
PITG_09531
Phytophthora infestans
PITG_09531
N
0.959
PITG_09534
Phytophthora infestans
PITG_09534
N
0.959
fgenesh_scip_prom.46568.10241
Phytophthora kernoviae
fgenesh_scip_prom.46568.10241
N
0.959
fgenesh_scip_prom.28083.11401
Phytophthora lateralis
fgenesh_scip_prom.28083.11401
N
1.000
F443_10240
Phytophthora parasitica
F443_10240
N
0.980
Phyra72995
Phytophthora ramorum
Phyra72995
N
0.714
Phyra80034
Phytophthora ramorum
Phyra80034
N
0.714
Physo141453
Phytophthora sojae
Physo141453
N
0.980
maker-pag1_scaffold_15-snap-gene-0.94
Pythium aphanidermatum
maker-pag1_scaffold_15-snap-gene-0.94
N
0.918
maker-par_contig_2670-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_2670-fgenesh-gene-0.0
N
0.939
maker-piw_contig_52-fgenesh-gene-0.18
Pythium iwayamai
maker-piw_contig_52-fgenesh-gene-0.18
N
0.959
PYU1_G013112
Pythium ultimum
PYU1_G013112
N
0.959
maker-pve_contig_1641-snap-gene-0.1
Pythium vexans
maker-pve_contig_1641-snap-gene-0.1
N
0.959