Bo00703s130 (Brassica oleracea)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 Bo00703s130 T321346_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo00703s130.1 S1FA 713 778

Links

Other S1FA family TFs
Other Brassica oleracea TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000018801 Astyanax mexicanus ENSAMXG00000018801 N
CGI_10026910 Crassostrea gigas CGI_10026910 N
glis2a Danio rerio ENSDARG00000078388 N
glis2b Danio rerio ENSDARG00000100232 N
ENSGMOG00000014914 Gadus morhua ENSGMOG00000014914 N
glis2b Gasterosteus aculeatus ENSGACG00000011323 N
ENSLOCG00000002612 Lepisosteus oculatus ENSLOCG00000002612 N
LotgiG97849 Lottia gigantea LotgiG97849 N
NEMVEDRAFT_v1g95177 Nematostella vectensis NEMVEDRAFT_v1g95177 N
ENSONIG00000005197 Oreochromis niloticus ENSONIG00000005197 N
glis2b Oryzias latipes ENSORLG00000008275 N
ENSPFOG00000011330 Poecilia formosa ENSPFOG00000011330 N
ENSPFOG00000009286 Poecilia formosa ENSPFOG00000009286 N
glis2b Takifugu rubripes ENSTRUG00000006205 N
glis2.S Xenopus laevis XB-GENE-6251812 N
ENSXMAG00000004642 Xiphophorus maculatus ENSXMAG00000004642 N
ENSXMAG00000013848 Xiphophorus maculatus ENSXMAG00000013848 N