OB04G18780 (Oryza brachyantha)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 OB04G18780 T321398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB04G18780.1 S1FA 15 80

Links

Other S1FA family TFs
Other Oryza brachyantha TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR03G10210 Leersia perrieri LPERR03G10210 N
OB03G21650 Oryza brachyantha OB03G21650 N
ORGLA03G0111000 Oryza glaberrima ORGLA03G0111000 N
OGLUM03G11450 Oryza glumaepatula OGLUM03G11450 N
BGIOSGA012273 Oryza indica BGIOSGA012273 N
OMERI03G10770 Oryza meridionalis OMERI03G10770 N
ONIVA03G12680 Oryza nivara ONIVA03G12680 N
OPUNC03G11040 Oryza punctata OPUNC03G11040 N
ORUFI03G11840 Oryza rufipogon ORUFI03G11840 N
Pavir.Ib01112 Panicum virgatum Pavir.Ib01112 N
Pavir.Ia03522 Panicum virgatum Pavir.Ia03522 N
Si040022m.g Setaria italica Si040022m.g N
Sb01g040270 Sorghum bicolor Sb01g040270 N
Traes_4AS_19FA06316 Triticum aestivum Traes_4AS_19FA06316 N
Traes_4BL_CDCFB216C Triticum aestivum Traes_4BL_CDCFB216C N
Traes_4DL_5B3B57371 Triticum aestivum Traes_4DL_5B3B57371 N
TRIUR3_13261 Triticum urartu TRIUR3_13261 N
GRMZM2G055263 Zea mays GRMZM2G055263 N