POPTR_0006s13230 (Populus trichocarpa)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 POPTR_0006s13230 T321423_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.803 0.803
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s13230.1 S1FA 23 88

Links

Other S1FA family TFs
Other Populus trichocarpa TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PVAR5_2508 Byssochlamys spectabilis PVAR5_2508 N
A1O3_01042 Capronia epimyces A1O3_01042 N
e_gw1.34.5.1 Cochliobolus heterostrophus C5 e_gw1.34.5.1 N
GLRG_06206 Colletotrichum graminicola GLRG_06206 N
MGYG_07243 Microsporum gypseum MGYG_07243 N
PEX1_085400 Penicillium expansum PEX1_085400 N
V499_02453 Pseudogymnoascus pannorum V499_02453 N