POPTR_0016s08890 (Populus trichocarpa)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 POPTR_0016s08890 T321425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
S1FA3
M07252_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT3G09735_col_a
0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s08890.1 S1FA 24 89

Links

Other S1FA family TFs
Other Populus trichocarpa TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006904 Ailuropoda melanoleuca ENSAMEG00000006904 N
ZNF408 Bos taurus ENSBTAG00000027557 N
ZNF408 Callithrix jacchus ENSCJAG00000019859 N
ZNF408 Canis familiaris ENSCAFG00000009143 N
ENSCSAG00000005681 Chlorocebus sabaeus ENSCSAG00000005681 N
ZNF408 Choloepus hoffmanni ENSCHOG00000009909 N
ZNF408 Dasypus novemcinctus ENSDNOG00000047669 N
Zfp408 Dipodomys ordii ENSDORG00000000387 N
ZNF408 Equus caballus ENSECAG00000010878 N
ZNF408 Erinaceus europaeus ENSEEUG00000010466 N
ZNF408 Felis catus ENSFCAG00000029105 N
ZNF408 Gorilla gorilla ENSGGOG00000010152 N
ZNF408 Homo sapiens ENSG00000175213 N
ENSSTOG00000005114 Ictidomys tridecemlineatus ENSSTOG00000005114 N
ZNF408 Loxodonta africana ENSLAFG00000027848 N
ENSP00000309606 Macaca fascicularis ENSP00000309606 N
ZNF408 Macaca mulatta ENSMMUG00000019673 N
ENSMPUG00000005490 Mustela putorius furo ENSMPUG00000005490 N
Myotis_brandtii_ZNF408_10025512 Myotis brandtii Myotis_brandtii_ZNF408_10025512 N
ZNF408 Myotis lucifugus ENSMLUG00000017629 N
ENSNLEG00000014132 Nomascus leucogenys ENSNLEG00000014132 N
ZNF408 Ochotona princeps ENSOPRG00000009225 N
ZNF408 Oryctolagus cuniculus ENSOCUG00000010953 N
ZNF408 Otolemur garnettii ENSOGAG00000034080 N
ZNF408 Pan troglodytes ENSPTRG00000003551 N
ENSPANG00000025797 Papio anubis ENSPANG00000025797 N
ENSPPYG00000003318 Pongo abelii ENSPPYG00000003318 N
ZNF408 Procavia capensis ENSPCAG00000014001 N
ZNF408 Pteropus vampyrus ENSPVAG00000015791 N
ZNF408 Sus scrofa ENSSSCG00000023097 N