chr1.CM0033.550.nc (Lotus japonicus)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 chr1.CM0033.550.nc T321533_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0033.550.nc S1FA 24 89

Links

Other S1FA family TFs
Other Lotus japonicus TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG018454.1 Alligator sinensis Alligator_sinensis_CCG018454.1 N
ANCCAN_13802 Ancylostoma caninum ANCCAN_13802 N
ANCDUO_07508 Ancylostoma duodenale ANCDUO_07508 N
AALB009198 Anopheles albimanus AALB009198 N
AARA001756 Anopheles arabiensis AARA001756 N
ADIR009951 Anopheles dirus ADIR009951 N
AEPI009631 Anopheles epiroticus AEPI009631 N
AMAM021135 Anopheles maculatus AMAM021135 N
ASTEI05791 Anopheles stephensi ASTEI05791 N
BTMF_0001537801 Brugia timori BTMF_0001537801 N
ENSCPOG00000025550 Cavia porcellus ENSCPOG00000025550 N
CLEC011939 Cimex lectularius CLEC011939 N
YQE_06158 Dendroctonus ponderosae YQE_06158 N
nDi.2.2.2.g11925 Dirofilaria immitis nDi.2.2.2.g11925 N
ECPE_0000807901 Echinostoma caproni ECPE_0000807901 N
Gfo_R008500 Geospiza fortis Gfo_R008500 N
ZIC4 Homo sapiens ENSG00000174963 D
ZIC1 Homo sapiens ENSG00000152977 D
ENSSTOG00000027399 Ictidomys tridecemlineatus ENSSTOG00000027399 I
ENSLACG00000015786 Latimeria chalumnae ENSLACG00000015786 N
LDEC018872 Leptinotarsa decemlineata LDEC018872 N
ZIC5 Loxodonta africana ENSLAFG00000009640 N
LCUP010714 Lucilia cuprina LCUP010714 N
ZIC3 Macaca mulatta ENSMMUG00000002023 N
ENSMEUG00000007408 Macropus eugenii ENSMEUG00000007408 N
MESCA007328 Megaselia scalaris MESCA007328 N
ENSMPUG00000011382 Mustela putorius furo ENSMPUG00000011382 N
Myotis_brandtii_Zic5_10007324 Myotis brandtii Myotis_brandtii_Zic5_10007324 N
ENSMLUG00000027631 Myotis lucifugus ENSMLUG00000027631 N
Ocbimv22019249m.g Octopus bimaculoides Ocbimv22019249m.g N
OFLC_0000964601 Onchocerca flexuosa OFLC_0000964601 N
ZIC5 Otolemur garnettii ENSOGAG00000024269 N
PPAI004317 Phlebotomus papatasi PPAI004317 N
scaffold799-EXSNAP2012.6 Pristionchus exspectatus scaffold799-EXSNAP2012.6 N
ENSSHAG00000004201 Sarcophilus harrisii ENSSHAG00000004201 N
L889_g1190 Steinernema feltiae L889_g1190 N
SMAR010285 Strigamia maritima SMAR010285 N
TELCIR_23243 Teladorsagia circumcincta TELCIR_23243 N
ENSTNIG00000017808 Tetraodon nigroviridis ENSTNIG00000017808 N
D917_03218 Trichinella nativa D917_03218 N
TRE_0000458501 Trichobilharzia regenti TRE_0000458501 N
WUBG_07674 Wuchereria bancrofti WUBG_07674 N
ENSXMAG00000013401 Xiphophorus maculatus ENSXMAG00000013401 N