ENSPFOG00000017553 (Poecilia formosa)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSPFOG00000017553 T321867_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.984 0.787
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.984 0.773
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.979 0.773
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.979 0.773
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.979 0.760
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.979 0.760
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.979 0.760
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.979 0.760
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.979 0.760
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.978 0.813
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.975 0.787
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.975 0.787
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.975 0.787
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.975 0.787
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.975 0.787
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.975 0.787
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.975 0.787
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.975 0.800
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.967 0.680
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000017661 SAND 78 153

Links

Other SAND family TFs
Other Poecilia formosa TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I
BHLH106 Arabidopsis thaliana AT2G41130 N
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N
Bo3g035410 Brassica oleracea Bo3g035410 N
Bo4g012960 Brassica oleracea Bo4g012960 N
Bo4g112750 Brassica oleracea Bo4g112750 N
Bo4g190700 Brassica oleracea Bo4g190700 N
Bra016951 Brassica rapa Bra016951 N
Bra004599 Brassica rapa Bra004599 N
Bra014672 Brassica rapa Bra014672 N
PK23387.1 Cannabis sativa PK23387.1 N
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N
Carubv10017947m.g Capsella rubella Carubv10017947m.g N
Carubv10023903m.g Capsella rubella Carubv10023903m.g N
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N
Ca_07159 Cicer arietinum Ca_07159 N
Cla017413 Citrullus lanatus Cla017413 N
Cla019977 Citrullus lanatus Cla019977 I
Cucsa.340200 Cucumis sativus Cucsa.340200 N
Cucsa.213230 Cucumis sativus Cucsa.213230 I
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N
GLYMA19G30910 Glycine max GLYMA19G30910 N
GLYMA03G28150 Glycine max GLYMA03G28150 N
GLYMA02G23590 Glycine max GLYMA02G23590 N
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N
Lus10042017.g Linum usitatissimum Lus10042017.g N
Lus10018020.g Linum usitatissimum Lus10018020.g N
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N
MDP0000213892 Malus domestica MDP0000213892 N
MDP0000138102 Malus domestica MDP0000138102 N
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N
OS03G0811400 Oryza sativa OS03G0811400 N
Pavir.J24868 Panicum virgatum Pavir.J24868 N
Pavir.J02699 Panicum virgatum Pavir.J02699 N
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N
Pm025589 Prunus mume Pm025589 N
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N
30180.m001071 Ricinus communis 30180.m001071 N
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N
Sb01g003830 Sorghum bicolor Sb01g003830 N
TCM_024016 Theobroma cacao TCM_024016 N
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I
GRMZM2G027068 Zea mays GRMZM2G027068 N