SPL10 (Arabidopsis thaliana)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 AT1G27370 T322389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL10
M01084_2.00		 Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.967 0.933
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.967 0.933
For this family, TFs with SR scores > 0.885 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01084_2.00 SBP 52 126

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G27370.1 SBP 176 250
AT1G27370.2 SBP 176 250
AT1G27370.3 SBP 176 250
AT1G27370.4 SBP 176 250
AT1G27370.5 SBP 176 250
AT1G27370.6 SBP 176 250
AT1G27370.7 SBP 176 250

Links

Other SBP family TFs
Other Arabidopsis thaliana TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB10540.1 Alternaria brassicicola AB10540.1 N
AB08131.1 Alternaria brassicicola AB08131.1 N
M437DRAFT_74830 Aureobasidium melanogenum M437DRAFT_74830 N
M438DRAFT_346203 Aureobasidium pullulans M438DRAFT_346203 N
AUEXF2481DRAFT_450827 Aureobasidium subglaciale AUEXF2481DRAFT_450827 N
BAUCODRAFT_79827 Baudoinia compniacensis BAUCODRAFT_79827 N
COCC4DRAFT_194294 Bipolaris maydis COCC4DRAFT_194294 N
COCMIDRAFT_26521 Bipolaris oryzae COCMIDRAFT_26521 N
COCSADRAFT_147534 Bipolaris sorokiniana COCSADRAFT_147534 N
COCVIDRAFT_33489 Bipolaris victoriae COCVIDRAFT_33489 N
COCCADRAFT_22008 Bipolaris zeicola COCCADRAFT_22008 N
BDDG_00151 Blastomyces dermatitidis BDDG_00151 N
fgenesh1_pg.C_scaffold_14000107 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_14000107 N
M7I_2968 Glarea lozoyensis M7I_2968 N
HCBG_00082 Histoplasma capsulatum HCBG_00082 N
LEMA_P063520.1 Leptosphaeria maculans LEMA_P063520.1 N
PABG_01478 Paracoccidioides brasiliensis PABG_01478 N
PAAG_00749 Paracoccidioides sp lutzii PAAG_00749 N
SNOG_03792 Phaeosphaeria nodorum SNOG_03792 N
PTT_14570 Pyrenophora teres PTT_14570 N
PTRG_08751 Pyrenophora triticirepentis PTRG_08751 N
SETTUDRAFT_182079 Setosphaeria turcica SETTUDRAFT_182079 N
SNOG_03792 Stagonospora nodorum SNOG_03792 N